RNAJunction Database - Junction Profile:8416
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8416: 1XNR_j3_A-U1000_A-G1022_A-A1035

Primary Citation: (from PDB entry 1XNR)

F.V.MURPHY V.RAMAKRISHNAN STRUCTURE OF A PURINE-PURINE WOBBLE BASE PAIR IN THE DECODING CENTER OF THE RIBOSOME. NAT.STRUCT.MOL.BIOL. V. 11 1251 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1XNR j3 A-U1000 A-G1022 A-A1035 
NC-IUBMB Classification:Cluster Page
Angles: 42:142:160°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.12749Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UGGGGUGCC 9nt

Strand 2: Chain A: GCUAGGAACCCG 12nt

Strand 3: Chain A: GGAGCCCUAGC 11nt

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