RNAJunction Database - Junction Profile:472

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 472: 1FKA_j3_A-C908_A-C1322_A-G1347

Primary Citation: (from PDB entry 1FKA)

F.SCHLUENZEN A.TOCILJ R.ZARIVACH J.HARMS M.GLUEHMANN D.JANELL A.BASHAN H.BARTELS I.AGMON F.FRANCESCHI A.YONATH STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION CELL (CAMBRIDGE,MASS.) V. 102 615 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1FKA j3 A-C908 A-C1322 A-G1347 
NC-IUBMB Classification:Cluster Page
Angles: 52:89:120°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.36783Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCUAGUAAUCGCG 13nt

Strand 2: Chain A: GCCCGCACAAGC 12nt

Strand 3: Chain A: CGCGGUGAAUACGUUCCCGGGC 22nt

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