RNAJunction Database - Junction Profile:1225

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1225: 1IBK_j3_A-G933_A-U1345_A-G1373

Primary Citation: (from PDB entry 1IBK)

J.M.OGLE D.E.BRODERSEN W.M.CLEMONS JR. M.J.TARRY A.P.CARTER V.RAMAKRISHNAN RECOGNITION OF COGNATE TRANSFER RNA BY THE 30S RIBOSOMAL SUBUNIT SCIENCE V. 292 897 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1IBK j3 A-G933 A-U1345 A-G1373 
NC-IUBMB Classification:Cluster Page
Angles: 55:86:125°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.81845Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCUAGUAAU 9nt

Strand 2: Chain A: CCGCACAAGC 10nt

Strand 3: Chain A: GUGAAUACGUUCCCGG 16nt

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