RNAJunction Database - Junction Profile:11968
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11968: 2J01_j6_A-U2074_A-U2243_A-C2258_A-C2281_A-G2384_A-A2425

Primary Citation: (from PDB entry 2J01)

M.SELMER C.M.DUNHAM F.V.MURPHY A.WEIXLBAUMER S.PETRY J.R.WEIR A.C.KELLEY V.RAMAKRISHNAN STRUCTURE OF THE 70S RIBOSOME COMPLEXED WITH MRNA AND TRNA. SCIENCE V. 313 1935 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:6-wayCluster:2J01 j6 A-U2074 A-U2243 A-C2258 A-C2281 A-G2384 A-A2425 
NC-IUBMB Classification:Cluster Page
Angles: 6:30:40:65:66:66:99:104:116:142:144:147:149:170:176°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.12029Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GUUUGA 6nt

Strand 2: Chain A: CUUUAC 6nt

Strand 3: Chain A: UCGC 4nt

Strand 4: Chain A: GCGCCC 6nt

Strand 5: Chain A: GGCCUAGUGA 10nt

Strand 6: Chain A: CAACGGAUAAAAG 13nt

Valid XHTML 1.0 Transitional