############# Start of Description of junction: j17 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS6HS4HS4 FINGERPRINT = 25:44:60:63:84:102 LOOP_LENGTH_SUM = 14 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1234 S1_NAME_ID3 = 1243 S1_NUM_ID5_ORIG = 1234 S1_NUM_ID3_ORIG = 1243 S1_NAME2_ID5 = 1236 S1_NAME2_ID3 = 1241 S1_NUM2_ID5_ORIG = 1236 S1_NUM2_ID3_ORIG = 1241 S1_SQ2 = ACAAUG S1_SQLEN2 = 6 S1_SQ = CUACAAUGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 942 S2_NAME_ID3 = 947 S2_NUM_ID5_ORIG = 942 S2_NUM_ID3_ORIG = 947 S2_NAME2_ID5 = 944 S2_NAME2_ID3 = 945 S2_NUM2_ID5_ORIG = 944 S2_NUM2_ID3_ORIG = 945 S2_SQ2 = GG S2_SQLEN2 = 2 S2_SQ = GUGGAG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1294 S3_NAME_ID3 = 1305 S3_NUM_ID5_ORIG = 1294 S3_NUM_ID3_ORIG = 1305 S3_NAME2_ID5 = 1296 S3_NAME2_ID3 = 1303 S3_NUM2_ID5_ORIG = 1296 S3_NUM2_ID3_ORIG = 1303 S3_SQ2 = CCCAGUUC S3_SQLEN2 = 8 S3_SQ = GGCCCAGUUCGG S3_SQLEN = 12 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1332 S4_NAME_ID3 = 1341 S4_NUM_ID5_ORIG = 1332 S4_NUM_ID3_ORIG = 1341 S4_NAME2_ID5 = 1334 S4_NAME2_ID3 = 1339 S4_NUM2_ID5_ORIG = 1334 S4_NUM2_ID3_ORIG = 1339 S4_SQ2 = GCCGGA S4_SQLEN2 = 6 S4_SQ = AAGCCGGAAU S4_SQLEN = 10 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 1236 H1_OUTID2_ORIG = 945 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 234.1447996078965 H1_P_Y = 114.90417987202683 H1_P_Z = -4.823426282136989 # Orientation: H1_DX_X = 0.9658045881445787 H1_DX_Y = -0.23912979353504227 H1_DX_Z = 0.10019201247003284 H1_DY_X = 0.09950392101376337 H1_DY_Y = 0.6987103882869121 H1_DY_Z = 0.7084509601961546 H1_DZ_X = -0.23941693177758339 H1_DZ_Y = -0.6742556897378336 H1_DZ_Z = 0.6986120508797136 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 1296 H2_OUTID2_ORIG = 1241 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 254.75408501685584 H2_P_Y = 138.34242661913498 H2_P_Z = -7.915217619947346 # Orientation: H2_DX_X = 0.15436264166939395 H2_DX_Y = -0.8919434200927299 H2_DX_Z = 0.4249813057184797 H2_DY_X = 0.9097138075046587 H2_DY_Y = 0.2961287607874681 H2_DY_Z = 0.2910816817834334 H2_DZ_X = -0.3854775781965145 H2_DZ_Y = 0.341679224401787 H2_DZ_Z = 0.8571244625606909 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 12 H3_INID2 = 3 H3_OUTID2 = 10 H3_INID2_ORIG = 1334 H3_OUTID2_ORIG = 1303 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 254.34013740475964 H3_P_Y = 115.8524482844515 H3_P_Z = -0.922880620305639 # Orientation: H3_DX_X = -0.9469887493386295 H3_DX_Y = 0.28559849648689806 H3_DX_Z = -0.14712514207465577 H3_DY_X = -0.28275418405351616 H3_DY_Y = -0.9583433659878011 H3_DY_Z = -0.040349278400084065 H3_DZ_X = -0.1525200971226468 H3_DZ_Y = 0.0033899368122689566 H3_DZ_Z = 0.9882945554348179 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 10 H4_INID2 = 3 H4_OUTID2 = 8 H4_INID2_ORIG = 944 H4_OUTID2_ORIG = 1339 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 226.8029986033898 H4_P_Y = 123.3612831498221 H4_P_Z = -18.580730100139125 # Orientation: H4_DX_X = -0.5101231329141456 H4_DX_Y = -0.6974507167559096 H4_DX_Z = 0.5033258258449607 H4_DY_X = 0.2759992660356829 H4_DY_Y = 0.42150760730622494 H4_DY_Z = 0.8638030690676821 H4_DZ_X = -0.8146157342045512 H4_DZ_Y = 0.5795634863236643 H4_DZ_Z = -0.022524895265519262 ############# END of Description of junction: j17