#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 172
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  24
S1_NAME_ID3 = 29
S1_NUM_ID5_ORIG =  24
S1_NUM_ID3_ORIG = 29
S1_NAME2_ID5 =  25
S1_NAME2_ID3 = 28
S1_NUM2_ID5_ORIG =  25
S1_NUM2_ID3_ORIG = 28
S1_SQ2 = UCGU
S1_SQLEN2 = 4
S1_SQ = AUCGUC
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 18
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 18
S2_NAME2_ID5 =  15
S2_NAME2_ID3 = 17
S2_NUM2_ID5_ORIG =  15
S2_NUM2_ID3_ORIG = 17
S2_SQ2 = AGG
S2_SQLEN2 = 3
S2_SQ = GAGGU
S2_SQLEN = 5
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 25
H1_OUTID2_ORIG = 17
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 0.9160439585721534
H1_P_Y = -3.2686743258278206
H1_P_Z = 28.024661806833944
# Orientation:
H1_DX_X = -0.5713639113956901
H1_DX_Y = -0.8153745239372672
H1_DX_Z = -0.09331487806718641
H1_DY_X = 0.7985222741829121
H1_DY_Y = -0.5785730867808412
H1_DY_Z = 0.16617870166371773
H1_DZ_X = -0.18948735680347717
H1_DZ_Y = 0.020434504323927793
H1_DZ_Z = 0.9816705010565734
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 15
H2_OUTID2_ORIG = 28
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -0.5771611788234634
H2_P_Y = -1.1880063717729266
H2_P_Z = 11.745639222187709
# Orientation:
H2_DX_X = -0.9252152591654429
H2_DX_Y = -0.373582999739269
H2_DX_Z = -0.06642639921922466
H2_DY_X = -0.37486164601613625
H2_DY_Y = 0.9270505254170848
H2_DY_Z = 0.007487968347982488
H2_DZ_X = 0.058783250620355165
H2_DZ_Y = 0.031828691925944286
H2_DZ_Z = -0.997763230339137
#############  END of Description of junction: j1