############# Start of Description of junction: j87 # Number of strands: NUM_STRANDS = 3 LILLEY = HS4HS10HS11 FINGERPRINT = 63:143:146 LOOP_LENGTH_SUM = 25 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 3066 S1_NAME_ID3 = 3080 S1_NUM_ID5_ORIG = 3066 S1_NUM_ID3_ORIG = 3080 S1_NAME2_ID5 = 3067 S1_NAME2_ID3 = 3079 S1_NUM2_ID5_ORIG = 3067 S1_NUM2_ID3_ORIG = 3079 S1_SQ2 = CGUUCCGGGGAGU S1_SQLEN2 = 13 S1_SQ = GCGUUCCGGGGAGUA S1_SQLEN = 15 S1_CHAR = 9 ## Properties of strand 2 S2_NAME_ID5 = 3008 S2_NAME_ID3 = 3015 S2_NUM_ID5_ORIG = 3008 S2_NUM_ID3_ORIG = 3015 S2_NAME2_ID5 = 3009 S2_NAME2_ID3 = 3014 S2_NUM2_ID5_ORIG = 3009 S2_NUM2_ID3_ORIG = 3014 S2_SQ2 = CCACAG S2_SQLEN2 = 6 S2_SQ = GCCACAGC S2_SQLEN = 8 S2_CHAR = 9 ## Properties of strand 3 S3_NAME_ID5 = 3102 S3_NAME_ID3 = 3115 S3_NUM_ID5_ORIG = 3102 S3_NUM_ID3_ORIG = 3115 S3_NAME2_ID5 = 3103 S3_NAME2_ID3 = 3114 S3_NUM2_ID5_ORIG = 3103 S3_NUM2_ID3_ORIG = 3114 S3_SQ2 = AAACCCGGUUCG S3_SQLEN2 = 12 S3_SQ = GAAACCCGGUUCGC S3_SQLEN = 14 S3_CHAR = 9 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 3067 H1_OUTID2_ORIG = 3014 H1_INSEQ_CHAR = 9 H1_OUTSEQ_CHAR = 9 # Position: H1_P_X = 57.82706067854402 H1_P_Y = 31.477564137749955 H1_P_Z = 117.5526285260333 # Orientation: H1_DX_X = 0.8032598589333659 H1_DX_Y = 0.3987167625862149 H1_DX_Z = -0.4424912906025611 H1_DY_X = 0.38155923951042325 H1_DY_Y = 0.2259990256506086 H1_DY_Z = 0.8962906822840466 H1_DZ_X = 0.45736871971153903 H1_DZ_Y = -0.8887909673470702 H1_DZ_Z = 0.029401880750739906 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 2 H2_OUTID2 = 14 H2_INID2_ORIG = 3103 H2_OUTID2_ORIG = 3079 H2_INSEQ_CHAR = 9 H2_OUTSEQ_CHAR = 9 # Position: H2_P_X = 37.57856516192116 H2_P_Y = 68.09004732746378 H2_P_Z = 117.59369511042809 # Orientation: H2_DX_X = 0.9004095879551102 H2_DX_Y = -0.006181541706808957 H2_DX_Z = 0.43499926719552207 H2_DY_X = 0.4243942929780644 H2_DY_Y = -0.20739792294767767 H2_DY_Z = -0.88140546041231 H2_DZ_X = 0.09566638911426395 H2_DZ_Y = 0.9782371338786504 H2_DZ_Z = -0.18411966732189455 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 14 H3_INID2 = 2 H3_OUTID2 = 13 H3_INID2_ORIG = 3009 H3_OUTID2_ORIG = 3114 H3_INSEQ_CHAR = 9 H3_OUTSEQ_CHAR = 9 # Position: H3_P_X = 54.16247691591815 H3_P_Y = 28.06492834414136 H3_P_Z = 99.51270950696315 # Orientation: H3_DX_X = -0.7226340179066142 H3_DX_Y = 0.32967617282135464 H3_DX_Z = 0.6075472798375472 H3_DY_X = -0.4180217883561994 H3_DY_Y = 0.49156849752476717 H3_DY_Z = -0.7639490799135302 H3_DZ_X = -0.5505069124212909 H3_DZ_Y = -0.8060235935226103 H3_DZ_Z = -0.21741229510142546 ############# END of Description of junction: j87