############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS3HS2 FINGERPRINT = 88:101:166 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 15 S1_NAME_ID3 = 22 S1_NUM_ID5_ORIG = 15 S1_NUM_ID3_ORIG = 22 S1_NAME2_ID5 = 17 S1_NAME2_ID3 = 20 S1_NUM2_ID5_ORIG = 17 S1_NUM2_ID3_ORIG = 20 S1_SQ2 = CGUU S1_SQLEN2 = 4 S1_SQ = GCCGUUCG S1_SQLEN = 8 S1_CHAR = Q ## Properties of strand 2 S2_NAME_ID5 = 5 S2_NAME_ID3 = 10 S2_NUM_ID5_ORIG = 5 S2_NUM_ID3_ORIG = 10 S2_NAME2_ID5 = 7 S2_NAME2_ID3 = 8 S2_NUM2_ID5_ORIG = 7 S2_NUM2_ID3_ORIG = 8 S2_SQ2 = CG S2_SQLEN2 = 2 S2_SQ = CUCGGC S2_SQLEN = 6 S2_CHAR = Q ## Properties of strand 3 S3_NAME_ID5 = 39 S3_NAME_ID3 = 47 S3_NUM_ID5_ORIG = 39 S3_NUM_ID3_ORIG = 47 S3_NAME2_ID5 = 41 S3_NAME2_ID3 = 45 S3_NUM2_ID5_ORIG = 41 S3_NUM2_ID3_ORIG = 45 S3_SQ2 = ACAGG S3_SQLEN2 = 5 S3_SQ = AGACAGGAG S3_SQLEN = 9 S3_CHAR = Q ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 17 H1_OUTID2_ORIG = 8 H1_INSEQ_CHAR = Q H1_OUTSEQ_CHAR = Q # Position: H1_P_X = -10.47822564995166 H1_P_Y = -11.16303811712072 H1_P_Z = -66.6182370071732 # Orientation: H1_DX_X = -0.4081243619829973 H1_DX_Y = 0.8981233076521953 H1_DX_Z = -0.16373463105847463 H1_DY_X = 0.9087471020521942 H1_DY_Y = 0.41681028161366385 H1_DY_Z = 0.021163498124707303 H1_DZ_X = 0.08725370861865756 H1_DZ_Y = -0.14015603231049312 H1_DZ_Z = -0.9862773833660015 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 41 H2_OUTID2_ORIG = 20 H2_INSEQ_CHAR = Q H2_OUTSEQ_CHAR = Q # Position: H2_P_X = -5.925835388324059 H2_P_Y = 10.494473434827228 H2_P_Z = -47.35162030696618 # Orientation: H2_DX_X = -0.2008737368936968 H2_DX_Y = 0.9554979780185988 H2_DX_Z = -0.21604017179387114 H2_DY_X = -0.2890443552575688 H2_DY_Y = 0.15290667509824907 H2_DY_Z = 0.9450253485511055 H2_DZ_X = 0.9360037940735584 H2_DZ_Y = 0.2522759653886233 H2_DZ_Z = 0.24546636178332193 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 7 H3_OUTID2_ORIG = 45 H3_INSEQ_CHAR = Q H3_OUTSEQ_CHAR = Q # Position: H3_P_X = -16.29596401368651 H3_P_Y = -4.489782038395696 H3_P_Z = -48.54618355569468 # Orientation: H3_DX_X = -0.9407902399523493 H3_DX_Y = -0.2746179594407021 H3_DX_Z = -0.19874280053129922 H3_DY_X = 0.19410207511761612 H3_DY_Y = -0.9170523063117271 H3_DY_Z = 0.34833812872462744 H3_DZ_X = -0.2779174496958312 H3_DZ_Y = 0.2891367217095864 H3_DZ_Z = 0.9160577750958723 ############# END of Description of junction: j3