############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS5HS20 FINGERPRINT = 149 LOOP_LENGTH_SUM = 25 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 784 S1_NAME_ID3 = 809 S1_NUM_ID5_ORIG = 784 S1_NUM_ID3_ORIG = 809 S1_NAME2_ID5 = 786 S1_NAME2_ID3 = 807 S1_NUM2_ID5_ORIG = 786 S1_NUM2_ID3_ORIG = 807 S1_SQ2 = UAGGAGUGAAAAGCUAACCGAA S1_SQLEN2 = 22 S1_SQ = UUUAGGAGUGAAAAGCUAACCGAACC S1_SQLEN = 26 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 694 S2_NAME_ID3 = 704 S2_NUM_ID5_ORIG = 694 S2_NUM_ID3_ORIG = 704 S2_NAME2_ID5 = 696 S2_NAME2_ID3 = 702 S2_NUM2_ID5_ORIG = 696 S2_NUM2_ID3_ORIG = 702 S2_SQ2 = UGAGCUA S2_SQLEN2 = 7 S2_SQ = GGUGAGCUAAG S2_SQLEN = 11 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 786 H1_OUTID2_ORIG = 702 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 39.81175267663496 H1_P_Y = 160.2798272866759 H1_P_Z = 139.12327758194868 # Orientation: H1_DX_X = 0.7411121972311321 H1_DX_Y = 0.4557477220926671 H1_DX_Z = -0.4929976926138693 H1_DY_X = -0.5147593626419535 H1_DY_Y = 0.8571341165976492 H1_DY_Z = 0.018544668689884247 H1_DZ_X = 0.4310168322556436 H1_DZ_Y = 0.24003149787418465 H1_DZ_Z = 0.8698329554233908 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 26 H2_INID2 = 3 H2_OUTID2 = 24 H2_INID2_ORIG = 696 H2_OUTID2_ORIG = 807 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 33.707391942032025 H2_P_Y = 151.66314254565415 H2_P_Z = 110.72572535757442 # Orientation: H2_DX_X = -0.695508079405414 H2_DX_Y = -0.3506205374805518 H2_DX_Z = 0.6271632564003227 H2_DY_X = -0.6750812722813819 H2_DY_Y = 0.6177594631612067 H2_DY_Z = -0.4032846655771891 H2_DZ_X = -0.24603615038597582 H2_DZ_Y = -0.7038739122681079 H2_DZ_Z = -0.666354056288128 ############# END of Description of junction: j9