############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 150 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 120 S1_NAME_ID3 = 128 S1_NUM_ID5_ORIG = 120 S1_NUM_ID3_ORIG = 128 S1_NAME2_ID5 = 122 S1_NAME2_ID3 = 126 S1_NUM2_ID5_ORIG = 122 S1_NUM2_ID3_ORIG = 126 S1_SQ2 = CAAAG S1_SQLEN2 = 5 S1_SQ = GACAAAGGU S1_SQLEN = 9 S1_CHAR = R ## Properties of strand 2 S2_NAME_ID5 = 94 S2_NAME_ID3 = 101 S2_NUM_ID5_ORIG = 94 S2_NUM_ID3_ORIG = 101 S2_NAME2_ID5 = 96 S2_NAME2_ID3 = 99 S2_NUM2_ID5_ORIG = 96 S2_NUM2_ID3_ORIG = 99 S2_SQ2 = UUAA S2_SQLEN2 = 4 S2_SQ = ACUUAAAU S2_SQLEN = 8 S2_CHAR = R ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 122 H1_OUTID2_ORIG = 99 H1_INSEQ_CHAR = R H1_OUTSEQ_CHAR = R # Position: H1_P_X = 3.4904961732806683 H1_P_Y = 37.47234406757087 H1_P_Z = 68.73484678747582 # Orientation: H1_DX_X = 0.3922360483178542 H1_DX_Y = -0.28757473588070326 H1_DX_Z = -0.8737572052253029 H1_DY_X = -0.7310246258161568 H1_DY_Y = 0.4791156861268959 H1_DY_Z = -0.48585096043693454 H1_DZ_X = 0.5583492445148819 H1_DZ_Y = 0.8293062947972203 H1_DZ_Z = -0.022297770277859286 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 96 H2_OUTID2_ORIG = 126 H2_INSEQ_CHAR = R H2_OUTSEQ_CHAR = R # Position: H2_P_X = -1.0152690833488767 H2_P_Y = 5.273578228915085 H2_P_Z = 63.7467833759914 # Orientation: H2_DX_X = 0.4135944643167455 H2_DX_Y = 0.12888667723153358 H2_DX_Z = 0.9012923185730415 H2_DY_X = -0.9065344247874447 H2_DY_Y = 0.15013810674730266 H2_DY_Z = 0.3945299552348871 H2_DZ_X = -0.08446866733791336 H2_DZ_Y = -0.9802279190752277 H2_DZ_Z = 0.17893649964053537 ############# END of Description of junction: j9