############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 153 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 120 S1_NAME_ID3 = 128 S1_NUM_ID5_ORIG = 120 S1_NUM_ID3_ORIG = 128 S1_NAME2_ID5 = 122 S1_NAME2_ID3 = 126 S1_NUM2_ID5_ORIG = 122 S1_NUM2_ID3_ORIG = 126 S1_SQ2 = CAAAG S1_SQLEN2 = 5 S1_SQ = GACAAAGGU S1_SQLEN = 9 S1_CHAR = P ## Properties of strand 2 S2_NAME_ID5 = 94 S2_NAME_ID3 = 101 S2_NUM_ID5_ORIG = 94 S2_NUM_ID3_ORIG = 101 S2_NAME2_ID5 = 96 S2_NAME2_ID3 = 99 S2_NUM2_ID5_ORIG = 96 S2_NUM2_ID3_ORIG = 99 S2_SQ2 = UUAA S2_SQLEN2 = 4 S2_SQ = ACUUAAAU S2_SQLEN = 8 S2_CHAR = P ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 122 H1_OUTID2_ORIG = 99 H1_INSEQ_CHAR = P H1_OUTSEQ_CHAR = P # Position: H1_P_X = 42.23526911769848 H1_P_Y = 29.472250219964792 H1_P_Z = 17.690252833065273 # Orientation: H1_DX_X = -0.4165714249953041 H1_DX_Y = -0.0035591332994613367 H1_DX_Z = -0.9090960237772094 H1_DY_X = 0.8759764720515761 H1_DY_Y = -0.26905695819001707 H1_DY_Z = -0.4003418210249876 H1_DZ_X = -0.24317374095375754 H1_DZ_Y = -0.9631176905340766 H1_DZ_Z = 0.11519915750934473 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 96 H2_OUTID2_ORIG = 126 H2_INSEQ_CHAR = P H2_OUTSEQ_CHAR = P # Position: H2_P_X = 36.435030501402814 H2_P_Y = 60.318193410492555 H2_P_Z = 7.3875506883225315 # Orientation: H2_DX_X = -0.46010948780759975 H2_DX_Y = -0.08787768523372108 H2_DX_Z = 0.8835025589478489 H2_DY_X = 0.8597308231157896 H2_DY_Y = 0.2044061176048686 H2_DY_Z = 0.4680609478159372 H2_DZ_X = -0.22172544061086086 H2_DZ_Y = 0.9749336651914646 H2_DZ_Z = -0.018498039416424028 ############# END of Description of junction: j3