############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 65:130:165 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 68 S1_NAME_ID3 = 77 S1_NUM_ID5_ORIG = 68 S1_NUM_ID3_ORIG = 77 S1_NAME2_ID5 = 70 S1_NAME2_ID3 = 75 S1_NUM2_ID5_ORIG = 70 S1_NUM2_ID3_ORIG = 75 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 54 S2_NAME_ID3 = 59 S2_NUM_ID5_ORIG = 54 S2_NUM_ID3_ORIG = 59 S2_NAME2_ID5 = 56 S2_NAME2_ID3 = 57 S2_NUM2_ID5_ORIG = 56 S2_NUM2_ID3_ORIG = 57 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 109 S3_NAME_ID3 = 116 S3_NUM_ID5_ORIG = 109 S3_NUM_ID3_ORIG = 116 S3_NAME2_ID5 = 111 S3_NAME2_ID3 = 114 S3_NUM2_ID5_ORIG = 111 S3_NUM2_ID3_ORIG = 114 S3_SQ2 = AUGU S3_SQLEN2 = 4 S3_SQ = GGAUGUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 70 H1_OUTID2_ORIG = 57 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -30.232314831081244 H1_P_Y = -73.3509078680794 H1_P_Z = 46.522704626746034 # Orientation: H1_DX_X = 0.9716600630599537 H1_DX_Y = 0.11517517951232037 H1_DX_Z = 0.2064252888544189 H1_DY_X = -0.06317556574138194 H1_DY_Y = -0.7149728342028112 H1_DY_Z = 0.69629210410951 H1_DZ_X = 0.22778404190720636 H1_DZ_Y = -0.6896002641938992 H1_DZ_Z = -0.6874342920426031 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 111 H2_OUTID2_ORIG = 75 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -26.68933933433707 H2_P_Y = -80.46446346127318 H2_P_Z = 68.26315221793003 # Orientation: H2_DX_X = 0.9274900338844816 H2_DX_Y = 0.33944415610650935 H2_DX_Z = 0.15665216860963938 H2_DY_X = -0.26415086370734997 H2_DY_Y = 0.29851132849994144 H2_DY_Z = 0.917123387532925 H2_DZ_X = 0.2645497273625885 H2_DZ_Y = -0.8920026074190304 H2_DZ_Z = 0.36653074920126016 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 56 H3_OUTID2_ORIG = 114 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = -32.8640856886702 H3_P_Y = -59.272353669514956 H3_P_Z = 58.866320252849896 # Orientation: H3_DX_X = 0.24524043257704875 H3_DX_Y = 0.5201338742116306 H3_DX_Z = -0.8181185018852872 H3_DY_X = -0.9442708055077702 H3_DY_Y = -0.06297006833229801 H3_DY_Z = -0.3230904151471137 H3_DZ_X = -0.21956724731875 H3_DZ_Y = 0.8517602499482066 H3_DZ_Z = 0.47570442557646686 ############# END of Description of junction: j1