############# Start of Description of junction: j42 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS6HS4HS4 FINGERPRINT = 23:44:63:82:104:125 LOOP_LENGTH_SUM = 14 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1235 S1_NAME_ID3 = 1242 S1_NUM_ID5_ORIG = 1235 S1_NUM_ID3_ORIG = 1242 S1_NAME2_ID5 = 1236 S1_NAME2_ID3 = 1241 S1_NUM2_ID5_ORIG = 1236 S1_NUM2_ID3_ORIG = 1241 S1_SQ2 = ACAAUG S1_SQLEN2 = 6 S1_SQ = UACAAUGC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 943 S2_NAME_ID3 = 946 S2_NUM_ID5_ORIG = 943 S2_NUM_ID3_ORIG = 946 S2_NAME2_ID5 = 944 S2_NAME2_ID3 = 945 S2_NUM2_ID5_ORIG = 944 S2_NUM2_ID3_ORIG = 945 S2_SQ2 = GG S2_SQLEN2 = 2 S2_SQ = UGGA S2_SQLEN = 4 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1295 S3_NAME_ID3 = 1304 S3_NUM_ID5_ORIG = 1295 S3_NUM_ID3_ORIG = 1304 S3_NAME2_ID5 = 1296 S3_NAME2_ID3 = 1303 S3_NUM2_ID5_ORIG = 1296 S3_NUM2_ID3_ORIG = 1303 S3_SQ2 = CCCAGUUC S3_SQLEN2 = 8 S3_SQ = GCCCAGUUCG S3_SQLEN = 10 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1333 S4_NAME_ID3 = 1340 S4_NUM_ID5_ORIG = 1333 S4_NUM_ID3_ORIG = 1340 S4_NAME2_ID5 = 1334 S4_NAME2_ID3 = 1339 S4_NUM2_ID5_ORIG = 1334 S4_NUM2_ID3_ORIG = 1339 S4_SQ2 = GCCGGA S4_SQLEN2 = 6 S4_SQ = AGCCGGAA S4_SQLEN = 8 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 4 H1_INID2 = 2 H1_OUTID2 = 3 H1_INID2_ORIG = 1236 H1_OUTID2_ORIG = 945 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -141.9015638528665 H1_P_Y = 27.944828856712366 H1_P_Z = 8.259314509226648 # Orientation: H1_DX_X = -0.31475942869130336 H1_DX_Y = -0.8035943211895464 H1_DX_Z = 0.5051362875520287 H1_DY_X = -0.9422632070391046 H1_DY_Y = 0.32863573166217463 H1_DY_Z = -0.06433198687477315 H1_DZ_X = -0.11430901412535377 H1_DZ_Y = -0.4962204377358823 H1_DZ_Z = -0.8606385573879987 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 2 H2_OUTID2 = 7 H2_INID2_ORIG = 1296 H2_OUTID2_ORIG = 1241 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -160.90017238265585 H2_P_Y = 40.773967718186036 H2_P_Z = 28.668796927274947 # Orientation: H2_DX_X = 0.29917376618456615 H2_DX_Y = -0.7311974307140261 H2_DX_Z = -0.6130622928741936 H2_DY_X = -0.9015707649793683 H2_DY_Y = -0.4270357629181447 H2_DY_Z = 0.06935858219013724 H2_DZ_X = -0.31251434104927966 H2_DZ_Y = 0.5319687721155546 H2_DZ_Z = -0.7869841244475069 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 2 H3_OUTID2 = 9 H3_INID2_ORIG = 1334 H3_OUTID2_ORIG = 1303 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = -159.211536997603 H3_P_Y = 20.825397157543442 H3_P_Z = 16.684702530620882 # Orientation: H3_DX_X = 0.4482675289942506 H3_DX_Y = 0.8922145579286074 H3_DX_Z = -0.054858044712197795 H3_DY_X = 0.7690763658378899 H3_DY_Y = -0.4162240665539443 H3_DY_Z = -0.485055738993843 H3_DZ_X = -0.4556070301904356 H3_DZ_Y = 0.17524471187902435 H3_DZ_Z = -0.8727608635814796 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 8 H4_INID2 = 2 H4_OUTID2 = 7 H4_INID2_ORIG = 944 H4_OUTID2_ORIG = 1339 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = -131.62093891308314 H4_P_Y = 29.738888334443942 H4_P_Z = 17.687106501703852 # Orientation: H4_DX_X = 0.6589854576535572 H4_DX_Y = -0.38628839648806945 H4_DX_Z = -0.6453831740445573 H4_DY_X = -0.46125802951840456 H4_DY_Y = 0.4702144607757255 H4_DY_Z = -0.7524223488720878 H4_DZ_X = 0.5941205238046621 H4_DZ_Y = 0.7935235570643542 H4_DZ_Z = 0.1316858670396961 ############# END of Description of junction: j42