############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 66:128:166 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 68 S1_NAME_ID3 = 77 S1_NUM_ID5_ORIG = 68 S1_NUM_ID3_ORIG = 77 S1_NAME2_ID5 = 70 S1_NAME2_ID3 = 75 S1_NUM2_ID5_ORIG = 70 S1_NUM2_ID3_ORIG = 75 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 54 S2_NAME_ID3 = 59 S2_NUM_ID5_ORIG = 54 S2_NUM_ID3_ORIG = 59 S2_NAME2_ID5 = 56 S2_NAME2_ID3 = 57 S2_NUM2_ID5_ORIG = 56 S2_NUM2_ID3_ORIG = 57 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 109 S3_NAME_ID3 = 116 S3_NUM_ID5_ORIG = 109 S3_NUM_ID3_ORIG = 116 S3_NAME2_ID5 = 111 S3_NAME2_ID3 = 114 S3_NUM2_ID5_ORIG = 111 S3_NUM2_ID3_ORIG = 114 S3_SQ2 = AUGU S3_SQLEN2 = 4 S3_SQ = GGAUGUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 70 H1_OUTID2_ORIG = 57 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 24.372054001574355 H1_P_Y = 160.956881485094 H1_P_Z = 183.63074466823159 # Orientation: H1_DX_X = 0.9647291126962045 H1_DX_Y = 0.213308969994074 H1_DX_Z = -0.15426283556473663 H1_DY_X = -0.04935452668771134 H1_DY_Y = 0.7221765582700641 H1_DY_Z = 0.6899457582887578 H1_DZ_X = 0.25857662270947657 H1_DZ_Y = -0.6579971899676025 H1_DZ_Z = 0.7072325135221718 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 111 H2_OUTID2_ORIG = 75 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 27.770652242791833 H2_P_Y = 183.23720275136344 H2_P_Z = 189.9447317626551 # Orientation: H2_DX_X = 0.9132427665035401 H2_DX_Y = 0.1728040822054595 H2_DX_Z = -0.36895311165795874 H2_DY_X = -0.30211621165991787 H2_DY_Y = 0.8948035959015215 H2_DY_Z = -0.32871312631831984 H2_DZ_X = 0.27333760092827575 H2_DZ_Y = 0.4116616012391887 H2_DZ_Z = 0.8693798260737253 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 56 H3_OUTID2_ORIG = 114 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 21.515926685613795 H3_P_Y = 173.05516923862123 H3_P_Z = 169.22026386707805 # Orientation: H3_DX_X = 0.20917923181834297 H3_DX_Y = -0.8339050547508009 H3_DX_Z = -0.5107312489332969 H3_DY_X = -0.9455471357845475 H3_DY_Y = -0.30567238561820886 H3_DY_Z = 0.11182578718765512 H3_DZ_X = -0.2493685284584899 H3_DZ_Y = 0.4595288373231199 H3_DZ_Z = -0.8524368508475675 ############# END of Description of junction: j1