############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 145 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 638 S1_NAME_ID3 = 646 S1_NUM_ID5_ORIG = 638 S1_NUM_ID3_ORIG = 646 S1_NAME2_ID5 = 640 S1_NAME2_ID3 = 644 S1_NUM2_ID5_ORIG = 640 S1_NUM2_ID3_ORIG = 644 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 593 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 593 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 595 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 595 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 640 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 14.121710782162948 H1_P_Y = 59.16594198536727 H1_P_Z = 72.77162394019642 # Orientation: H1_DX_X = -0.39509111795022633 H1_DX_Y = 0.031880997503954234 H1_DX_Z = -0.9180885635465614 H1_DY_X = 0.6576862758142852 H1_DY_Y = -0.6879317338045965 H1_DY_Z = -0.3069180545848411 H1_DZ_X = -0.6413671110388961 H1_DZ_Y = -0.7250748455316582 H1_DZ_Z = 0.250828023264674 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 595 H2_OUTID2_ORIG = 644 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 19.730138290520653 H2_P_Y = 80.99714001067649 H2_P_Z = 64.1915348675786 # Orientation: H2_DX_X = 0.009345520591619305 H2_DX_Y = -0.062243060630606806 H2_DX_Z = 0.9980172657064657 H2_DY_X = 0.9805815768769612 H2_DY_Y = -0.19494705917746558 H2_DY_Z = -0.02134045940330509 H2_DZ_X = 0.19588882646632655 H2_DZ_Y = 0.9788367818596697 H2_DZ_Z = 0.05921251678698525 ############# END of Description of junction: j9