############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 62:128:169 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 68 S1_NAME_ID3 = 77 S1_NUM_ID5_ORIG = 68 S1_NUM_ID3_ORIG = 77 S1_NAME2_ID5 = 70 S1_NAME2_ID3 = 75 S1_NUM2_ID5_ORIG = 70 S1_NUM2_ID3_ORIG = 75 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 54 S2_NAME_ID3 = 59 S2_NUM_ID5_ORIG = 54 S2_NUM_ID3_ORIG = 59 S2_NAME2_ID5 = 56 S2_NAME2_ID3 = 57 S2_NUM2_ID5_ORIG = 56 S2_NUM2_ID3_ORIG = 57 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 109 S3_NAME_ID3 = 116 S3_NUM_ID5_ORIG = 109 S3_NUM_ID3_ORIG = 116 S3_NAME2_ID5 = 111 S3_NAME2_ID3 = 114 S3_NUM2_ID5_ORIG = 111 S3_NUM2_ID3_ORIG = 114 S3_SQ2 = AUGU S3_SQLEN2 = 4 S3_SQ = GGAUGUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 70 H1_OUTID2_ORIG = 57 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 333.6494290045366 H1_P_Y = 75.21892701743577 H1_P_Z = 42.55927163101566 # Orientation: H1_DX_X = 0.34971057091900093 H1_DX_Y = 0.295417954119614 H1_DX_Z = -0.88906172393785 H1_DY_X = 0.8083600901655927 H1_DY_Y = -0.5748347982795963 H1_DY_Z = 0.12696030605781772 H1_DZ_X = -0.4735572628679279 H1_DZ_Y = -0.7630813764406952 H1_DZ_Z = -0.4398298895191459 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 111 H2_OUTID2_ORIG = 75 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 356.13224515688916 H2_P_Y = 72.55961205036583 H2_P_Z = 42.87464799560862 # Orientation: H2_DX_X = 0.26825738140871636 H2_DX_Y = 0.37074684833140736 H2_DX_Z = -0.8891483294546774 H2_DY_X = 0.8126446387459509 H2_DY_Y = 0.4085771413419792 H2_DY_Z = 0.41553990264505103 H2_DZ_X = 0.5173457919391922 H2_DZ_Y = -0.8340332691356735 H2_DZ_Z = -0.1916816045886236 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 56 H3_OUTID2_ORIG = 114 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 343.357884889579 H3_P_Y = 90.61703516115125 H3_P_Z = 48.83234317532556 # Orientation: H3_DX_X = -0.8441807524955607 H3_DX_Y = 0.4479403713289116 H3_DX_Z = -0.29446269857101015 H3_DY_X = -0.4181513503544352 H3_DY_Y = -0.20654111301350042 H3_DY_Z = 0.8845847708568542 H3_DZ_X = 0.33542257722569957 H3_DZ_Y = 0.8698794125445488 H3_DZ_Z = 0.3616649033544803 ############# END of Description of junction: j1