############# Start of Description of junction: j34 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS6HS4HS4 FINGERPRINT = 37:57:61:66:97:104 LOOP_LENGTH_SUM = 14 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1234 S1_NAME_ID3 = 1243 S1_NUM_ID5_ORIG = 1234 S1_NUM_ID3_ORIG = 1243 S1_NAME2_ID5 = 1236 S1_NAME2_ID3 = 1241 S1_NUM2_ID5_ORIG = 1236 S1_NUM2_ID3_ORIG = 1241 S1_SQ2 = ACAAUG S1_SQLEN2 = 6 S1_SQ = CUACAAUGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 942 S2_NAME_ID3 = 947 S2_NUM_ID5_ORIG = 942 S2_NUM_ID3_ORIG = 947 S2_NAME2_ID5 = 944 S2_NAME2_ID3 = 945 S2_NUM2_ID5_ORIG = 944 S2_NUM2_ID3_ORIG = 945 S2_SQ2 = GG S2_SQLEN2 = 2 S2_SQ = GUGGAG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1294 S3_NAME_ID3 = 1305 S3_NUM_ID5_ORIG = 1294 S3_NUM_ID3_ORIG = 1305 S3_NAME2_ID5 = 1296 S3_NAME2_ID3 = 1303 S3_NUM2_ID5_ORIG = 1296 S3_NUM2_ID3_ORIG = 1303 S3_SQ2 = CCCAGUUC S3_SQLEN2 = 8 S3_SQ = GGCCCAGUUCGG S3_SQLEN = 12 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1332 S4_NAME_ID3 = 1341 S4_NUM_ID5_ORIG = 1332 S4_NUM_ID3_ORIG = 1341 S4_NAME2_ID5 = 1334 S4_NAME2_ID3 = 1339 S4_NUM2_ID5_ORIG = 1334 S4_NUM2_ID3_ORIG = 1339 S4_SQ2 = GCCGGA S4_SQLEN2 = 6 S4_SQ = AAGCCGGAAU S4_SQLEN = 10 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 1236 H1_OUTID2_ORIG = 945 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 259.7761260145444 H1_P_Y = 152.76865918753526 H1_P_Z = 155.17388809476435 # Orientation: H1_DX_X = 0.35341836746721356 H1_DX_Y = -0.5763836401482934 H1_DX_Z = 0.7368021151613107 H1_DY_X = -0.5573009260462527 H1_DY_Y = 0.5028752359470161 H1_DY_Z = 0.6607058156995436 H1_DZ_X = -0.7513395606280824 H1_DZ_Y = -0.6441260718528952 H1_DZ_Z = -0.1434937914844454 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 1296 H2_OUTID2_ORIG = 1241 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 273.74333878105557 H2_P_Y = 167.85614542225534 H2_P_Z = 179.01092201100104 # Orientation: H2_DX_X = -0.3727898740859814 H2_DX_Y = -0.9257357917423974 H2_DX_Z = 0.06356849586097724 H2_DY_X = 0.21205751691354635 H2_DY_Y = -0.018300057854673923 H2_DY_Z = 0.9770858290872013 H2_DZ_X = -0.9033600164383415 H2_DZ_Y = 0.37772788058279616 H2_DZ_Z = 0.20313130957828207 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 12 H3_INID2 = 3 H3_OUTID2 = 10 H3_INID2_ORIG = 1334 H3_OUTID2_ORIG = 1303 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 268.84921105106395 H3_P_Y = 147.05446927336845 H3_P_Z = 174.7659269011941 # Orientation: H3_DX_X = -0.5483673681280266 H3_DX_Y = 0.5689020350139344 H3_DX_Z = -0.612897792563615 H3_DY_X = -0.3100753096606468 H3_DY_Y = -0.8190057338580914 H3_DY_Z = -0.4827866094315709 H3_DZ_X = -0.7766250909616588 H3_DZ_Y = -0.07469994956198889 H3_DZ_Z = 0.6255184934310307 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 10 H4_INID2 = 3 H4_OUTID2 = 8 H4_INID2_ORIG = 944 H4_OUTID2_ORIG = 1339 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 269.75769968886186 H4_P_Y = 163.93502185616558 H4_P_Z = 145.77459413591976 # Orientation: H4_DX_X = -0.749536789597812 H4_DX_Y = -0.50646557339266 H4_DX_Z = -0.42624784340506494 H4_DY_X = -0.5898893813786685 H4_DY_Y = 0.21884438791559546 H4_DY_Z = 0.7772629230926498 H4_DZ_X = -0.3003749636306452 H4_DZ_Y = 0.8340262327084815 H4_DZ_Z = -0.4627905837179469 ############# END of Description of junction: j34