############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 3 LILLEY = 3HS19 FINGERPRINT = 35:120:155 LOOP_LENGTH_SUM = 19 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 176 S1_NAME_ID3 = 200 S1_NUM_ID5_ORIG = 176 S1_NUM_ID3_ORIG = 200 S1_NAME2_ID5 = 178 S1_NAME2_ID3 = 198 S1_NUM2_ID5_ORIG = 178 S1_NUM2_ID3_ORIG = 198 S1_SQ2 = CAUGUGGACCUUGGUCCAAAG S1_SQLEN2 = 21 S1_SQ = CCCAUGUGGACCUUGGUCCAAAGGG S1_SQLEN = 25 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 141 S2_NAME_ID3 = 146 S2_NUM_ID5_ORIG = 141 S2_NUM_ID3_ORIG = 146 S2_NAME2_ID5 = 143 S2_NAME2_ID3 = 144 S2_NUM2_ID5_ORIG = 143 S2_NUM2_ID3_ORIG = 144 S2_SQ2 = AG S2_SQLEN2 = 2 S2_SQ = AGAGGG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 217 S3_NAME_ID3 = 222 S3_NUM_ID5_ORIG = 217 S3_NUM_ID3_ORIG = 222 S3_NAME2_ID5 = 219 S3_NAME2_ID3 = 220 S3_NUM2_ID5_ORIG = 219 S3_NUM2_ID3_ORIG = 220 S3_SQ2 = CG S3_SQLEN2 = 2 S3_SQ = CCCGCU S3_SQLEN = 6 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 178 H1_OUTID2_ORIG = 144 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 194.1716199460339 H1_P_Y = 119.73781113871003 H1_P_Z = 15.520667684949544 # Orientation: H1_DX_X = -0.006788029967623288 H1_DX_Y = -0.3977712920769818 H1_DX_Z = -0.9174594933012425 H1_DY_X = 0.818347220102936 H1_DY_Y = -0.5294833344493242 H1_DY_Z = 0.22350665737329045 H1_DZ_X = -0.5746840436265188 H1_DZ_Y = -0.7492832560119354 H1_DZ_Z = 0.3291091798495476 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 25 H2_INID2 = 3 H2_OUTID2 = 23 H2_INID2_ORIG = 219 H2_OUTID2_ORIG = 198 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 178.10286278756033 H2_P_Y = 128.0414599787749 H2_P_Z = 16.320057300976753 # Orientation: H2_DX_X = -0.013888466937714838 H2_DX_Y = -0.2943984292459305 H2_DX_Z = 0.9555818517236752 H2_DY_X = -0.5581829320264831 H2_DY_Y = 0.7951879464533249 H2_DY_Z = 0.2368711552926861 H2_DZ_X = -0.8296016663920511 H2_DZ_Y = -0.5300997025776155 H2_DZ_Z = -0.17537211992408075 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 3 H3_OUTID2 = 4 H3_INID2_ORIG = 143 H3_OUTID2_ORIG = 220 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 193.69986823453962 H3_P_Y = 140.1557665545825 H3_P_Z = 20.69428348807041 # Orientation: H3_DX_X = 0.4259436885686796 H3_DX_Y = -0.9033455919025641 H3_DX_Z = -0.050385670172552466 H3_DY_X = 0.48330087949605627 H3_DY_Y = 0.27425707456163195 H3_DY_Z = -0.8313863824547809 H3_DZ_X = 0.7648478502596845 H3_DZ_Y = 0.32977234366015296 H3_DZ_Z = 0.5534057890102098 ############# END of Description of junction: j4