############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 62:126:170 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 68 S1_NAME_ID3 = 77 S1_NUM_ID5_ORIG = 68 S1_NUM_ID3_ORIG = 77 S1_NAME2_ID5 = 70 S1_NAME2_ID3 = 75 S1_NUM2_ID5_ORIG = 70 S1_NUM2_ID3_ORIG = 75 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 54 S2_NAME_ID3 = 59 S2_NUM_ID5_ORIG = 54 S2_NUM_ID3_ORIG = 59 S2_NAME2_ID5 = 56 S2_NAME2_ID3 = 57 S2_NUM2_ID5_ORIG = 56 S2_NUM2_ID3_ORIG = 57 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 109 S3_NAME_ID3 = 116 S3_NUM_ID5_ORIG = 109 S3_NUM_ID3_ORIG = 116 S3_NAME2_ID5 = 111 S3_NAME2_ID3 = 114 S3_NUM2_ID5_ORIG = 111 S3_NUM2_ID3_ORIG = 114 S3_SQ2 = AUGU S3_SQLEN2 = 4 S3_SQ = GGAUGUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 70 H1_OUTID2_ORIG = 57 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 333.8408924194868 H1_P_Y = 75.2517991059741 H1_P_Z = 42.80843900076573 # Orientation: H1_DX_X = 0.3386897916419116 H1_DX_Y = 0.3244580156951571 H1_DX_Z = -0.8831852699681519 H1_DY_X = 0.8290005570764833 H1_DY_Y = -0.5468709488161068 H1_DY_Z = 0.11700530632349171 H1_DZ_X = -0.44502505705236217 H1_DZ_Y = -0.7717895836250506 H1_DZ_Z = -0.4541954834687303 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 111 H2_OUTID2_ORIG = 75 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 356.4432000862072 H2_P_Y = 72.49744411965855 H2_P_Z = 43.54609624279093 # Orientation: H2_DX_X = 0.259117269436274 H2_DX_Y = 0.46508007229012094 H2_DX_Z = -0.8464979427255273 H2_DY_X = 0.7807541112560443 H2_DY_Y = 0.4150806956254769 H2_DY_Z = 0.46704500198146803 H2_DZ_X = 0.5685782781962985 H2_DZ_Y = -0.7819261745700032 H2_DZ_Z = -0.2555586020575831 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 56 H3_OUTID2_ORIG = 114 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 343.3801299688712 H3_P_Y = 90.6392343866419 H3_P_Z = 49.57924003445598 # Orientation: H3_DX_X = -0.8378941046707951 H3_DX_Y = 0.4516967166657935 H3_DX_Z = -0.30643685403559573 H3_DY_X = -0.43720382134290503 H3_DY_Y = -0.21928495015816907 H3_DY_Z = 0.8722195418799927 H3_DZ_X = 0.32678171301512293 H3_DZ_Y = 0.8648029757045776 H3_DZ_Z = 0.3812210975948531 ############# END of Description of junction: j1