############# Start of Description of junction: j29 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS6HS4HS4 FINGERPRINT = 30:54:65:66:96:106 LOOP_LENGTH_SUM = 14 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1234 S1_NAME_ID3 = 1243 S1_NUM_ID5_ORIG = 1234 S1_NUM_ID3_ORIG = 1243 S1_NAME2_ID5 = 1236 S1_NAME2_ID3 = 1241 S1_NUM2_ID5_ORIG = 1236 S1_NUM2_ID3_ORIG = 1241 S1_SQ2 = ACAAUG S1_SQLEN2 = 6 S1_SQ = CUACAAUGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 942 S2_NAME_ID3 = 947 S2_NUM_ID5_ORIG = 942 S2_NUM_ID3_ORIG = 947 S2_NAME2_ID5 = 944 S2_NAME2_ID3 = 945 S2_NUM2_ID5_ORIG = 944 S2_NUM2_ID3_ORIG = 945 S2_SQ2 = GG S2_SQLEN2 = 2 S2_SQ = GUGGAG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1294 S3_NAME_ID3 = 1305 S3_NUM_ID5_ORIG = 1294 S3_NUM_ID3_ORIG = 1305 S3_NAME2_ID5 = 1296 S3_NAME2_ID3 = 1303 S3_NUM2_ID5_ORIG = 1296 S3_NUM2_ID3_ORIG = 1303 S3_SQ2 = CCCAGUUC S3_SQLEN2 = 8 S3_SQ = GGCCCAGUUCGG S3_SQLEN = 12 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1332 S4_NAME_ID3 = 1341 S4_NUM_ID5_ORIG = 1332 S4_NUM_ID3_ORIG = 1341 S4_NAME2_ID5 = 1334 S4_NAME2_ID3 = 1339 S4_NUM2_ID5_ORIG = 1334 S4_NUM2_ID3_ORIG = 1339 S4_SQ2 = GCCGGA S4_SQLEN2 = 6 S4_SQ = AAGCCGGAAU S4_SQLEN = 10 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 1236 H1_OUTID2_ORIG = 945 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 258.94659179917437 H1_P_Y = 152.77303330001902 H1_P_Z = 155.47002090978447 # Orientation: H1_DX_X = 0.36252641449129897 H1_DX_Y = -0.5850645446138287 H1_DX_Z = 0.7254475014995023 H1_DY_X = -0.5353736577674795 H1_DY_Y = 0.5064143928034355 H1_DY_Z = 0.6759582156687998 H1_DZ_X = -0.7628562416109048 H1_DZ_Y = -0.6334381906684428 H1_DZ_Z = -0.12963955121020376 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 1296 H2_OUTID2_ORIG = 1241 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 273.62174070345736 H2_P_Y = 168.00142294978826 H2_P_Z = 179.51412409552475 # Orientation: H2_DX_X = -0.37696623414279884 H2_DX_Y = -0.9250334799936297 H2_DX_Z = 0.04700552315460982 H2_DY_X = 0.21354126477024238 H2_DY_Y = -0.03741512256789292 H2_DY_Z = 0.9762173102560325 H2_DZ_X = -0.9012749783260006 H2_DZ_Y = 0.37803858201789353 H2_DZ_Z = 0.21163705712709202 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 12 H3_INID2 = 3 H3_OUTID2 = 10 H3_INID2_ORIG = 1334 H3_OUTID2_ORIG = 1303 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 267.27954313178947 H3_P_Y = 148.15181651969016 H3_P_Z = 175.19545415129681 # Orientation: H3_DX_X = -0.4704643033544471 H3_DX_Y = 0.5158167330188235 H3_DX_Z = -0.7159584046626151 H3_DY_X = -0.2591726306729356 H3_DY_Y = -0.8563463104616744 H3_DY_Z = -0.4466548377313302 H3_DZ_X = -0.8435003774624192 H3_DZ_Y = -0.02457833388433528 H3_DZ_Z = 0.536565950023089 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 10 H4_INID2 = 3 H4_OUTID2 = 8 H4_INID2_ORIG = 944 H4_OUTID2_ORIG = 1339 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 269.66003811217576 H4_P_Y = 163.6793681064163 H4_P_Z = 146.35846063923427 # Orientation: H4_DX_X = -0.7417106930873842 H4_DX_Y = -0.5019529277005006 H4_DX_Z = -0.44486908875842346 H4_DY_X = -0.6274892850326523 H4_DY_Y = 0.28503292634266586 H4_DY_Z = 0.7245781034986294 H4_DZ_X = -0.23690176219059822 H4_DZ_Y = 0.8165779137800655 H4_DZ_Z = -0.5263820530732062 ############# END of Description of junction: j29