############# Start of Description of junction: j29 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS7HS3HS23HS12HS2HS2 FINGERPRINT = 22:24:30:33:35:37:57:61:62:74:81:115:119:125:138:139:144:146:148:154:178 LOOP_LENGTH_SUM = 49 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2241 S1_NAME_ID3 = 2248 S1_NUM_ID5_ORIG = 2241 S1_NUM_ID3_ORIG = 2248 S1_NAME2_ID5 = 2243 S1_NAME2_ID3 = 2246 S1_NUM2_ID5_ORIG = 2243 S1_NUM2_ID3_ORIG = 2246 S1_SQ2 = UUUG S1_SQLEN2 = 4 S1_SQ = AGUUUGAC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2072 S2_NAME_ID3 = 2079 S2_NUM_ID5_ORIG = 2072 S2_NUM_ID3_ORIG = 2079 S2_NAME2_ID5 = 2074 S2_NAME2_ID3 = 2077 S2_NUM2_ID5_ORIG = 2074 S2_NUM2_ID3_ORIG = 2077 S2_SQ2 = UUUA S2_SQLEN2 = 4 S2_SQ = GCUUUACU S2_SQLEN = 8 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2256 S3_NAME_ID3 = 2261 S3_NUM_ID5_ORIG = 2256 S3_NUM_ID3_ORIG = 2261 S3_NAME2_ID5 = 2258 S3_NAME2_ID3 = 2259 S3_NUM2_ID5_ORIG = 2258 S3_NUM2_ID3_ORIG = 2259 S3_SQ2 = CG S3_SQLEN2 = 2 S3_SQ = GUCGCC S3_SQLEN = 6 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2279 S4_NAME_ID3 = 2291 S4_NUM_ID5_ORIG = 2279 S4_NUM_ID3_ORIG = 2291 S4_NAME2_ID5 = 2281 S4_NAME2_ID3 = 2289 S4_NUM2_ID5_ORIG = 2281 S4_NUM2_ID3_ORIG = 2289 S4_SQ2 = CGCCCAAAG S4_SQLEN2 = 9 S4_SQ = GGCGCCCAAAGGU S4_SQLEN = 13 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 2341 S5_NAME_ID3 = 2349 S5_NUM_ID5_ORIG = 2341 S5_NUM_ID3_ORIG = 2349 S5_NAME2_ID5 = 2343 S5_NAME2_ID3 = 2347 S5_NUM2_ID5_ORIG = 2343 S5_NUM2_ID3_ORIG = 2347 S5_SQ2 = CUGAC S5_SQLEN2 = 5 S5_SQ = GCCUGACUG S5_SQLEN = 9 S5_CHAR = A ## Properties of strand 6 S6_NAME_ID5 = 2368 S6_NAME_ID3 = 2396 S6_NUM_ID5_ORIG = 2368 S6_NUM_ID3_ORIG = 2396 S6_NAME2_ID5 = 2370 S6_NAME2_ID3 = 2394 S6_NUM2_ID5_ORIG = 2370 S6_NUM2_ID3_ORIG = 2394 S6_SQ2 = GGGGCGAAAGCCGGGCCUAGUGAAC S6_SQLEN2 = 25 S6_SQ = CAGGGGCGAAAGCCGGGCCUAGUGAACCG S6_SQLEN = 29 S6_CHAR = A ## Properties of strand 7 S7_NAME_ID5 = 2420 S7_NAME_ID3 = 2437 S7_NUM_ID5_ORIG = 2420 S7_NUM_ID3_ORIG = 2437 S7_NAME2_ID5 = 2422 S7_NAME2_ID3 = 2435 S7_NUM2_ID5_ORIG = 2422 S7_NUM2_ID3_ORIG = 2435 S7_SQ2 = AUCAACGGAUAAAA S7_SQLEN2 = 14 S7_SQ = CGAUCAACGGAUAAAAGU S7_SQLEN = 18 S7_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 2243 H1_OUTID2_ORIG = 2077 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 312.91830961061595 H1_P_Y = 111.32554322754449 H1_P_Z = 96.82323903310316 # Orientation: H1_DX_X = 0.5938438313457937 H1_DX_Y = -0.38532628577738137 H1_DX_Z = 0.7063095337467331 H1_DY_X = 0.5937074542826508 H1_DY_Y = -0.3826056187219393 H1_DY_Z = -0.7079014050357415 H1_DZ_X = 0.5430110152673819 H1_DZ_Y = 0.8397241177978714 H1_DZ_Z = 0.0015631016808157483 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 2258 H2_OUTID2_ORIG = 2246 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 296.04986242310235 H2_P_Y = 92.29576853290433 H2_P_Z = 110.41096456417748 # Orientation: H2_DX_X = 0.41602624709224756 H2_DX_Y = -0.8122171337666373 H2_DX_Z = 0.40893213293433917 H2_DY_X = -0.6999801895235578 H2_DY_Y = 0.001026158690976331 H2_DY_Z = 0.7141615232375358 H2_DZ_X = -0.5804738547126362 H2_DZ_Y = -0.5833543302438358 H2_DZ_Z = -0.5681089942791289 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 3 H3_OUTID2 = 4 H3_INID2_ORIG = 2281 H3_OUTID2_ORIG = 2259 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 297.55528879290694 H3_P_Y = 86.94023955760947 H3_P_Z = 132.68210789024343 # Orientation: H3_DX_X = 0.7978880746688333 H3_DX_Y = 0.09712921125216667 H3_DX_Z = 0.5949290181382025 H3_DY_X = -0.5996676211287877 H3_DY_Y = 0.2284648179297193 H3_DY_Z = 0.7669436557779648 H3_DZ_X = -0.06142771744947595 H3_DZ_Y = -0.9686948659355323 H3_DZ_Z = 0.24053459676122202 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 13 H4_INID2 = 3 H4_OUTID2 = 11 H4_INID2_ORIG = 2343 H4_OUTID2_ORIG = 2289 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 312.6240178503346 H4_P_Y = 99.63306537603164 H4_P_Z = 163.90976438889044 # Orientation: H4_DX_X = 0.8442144894793842 H4_DX_Y = -0.5346506716555268 H4_DX_Z = 0.03808615301355189 H4_DY_X = 0.20084250063649733 H4_DY_Y = 0.3814083450278929 H4_DY_Z = 0.9023247554407305 H4_DZ_X = -0.49695491313718776 H4_DZ_Y = -0.7541063145481388 H4_DZ_Z = 0.42937102914314096 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 9 H5_INID2 = 3 H5_OUTID2 = 7 H5_INID2_ORIG = 2370 H5_OUTID2_ORIG = 2347 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 328.25574430494714 H5_P_Y = 86.85332419172049 H5_P_Z = 151.8227108392984 # Orientation: H5_DX_X = 0.7556049012720223 H5_DX_Y = 0.3903827226176304 H5_DX_Z = -0.5259872270837889 H5_DY_X = 0.5633324037021339 H5_DY_Y = -0.7970334378167365 H5_DY_Z = 0.2177023241521283 H5_DZ_X = -0.33424218182761933 H5_DZ_Y = -0.4608025920973944 H5_DZ_Z = -0.8221576095880039 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 29 H6_INID2 = 3 H6_OUTID2 = 27 H6_INID2_ORIG = 2422 H6_OUTID2_ORIG = 2394 H6_INSEQ_CHAR = A H6_OUTSEQ_CHAR = A # Position: H6_P_X = 331.3164155623584 H6_P_Y = 99.80607184058152 H6_P_Z = 129.4590695632615 # Orientation: H6_DX_X = -0.22886924475591286 H6_DX_Y = 0.5683337103658772 H6_DX_Z = -0.7903263012620982 H6_DY_X = -0.30068417997028973 H6_DY_Y = 0.7309019796396541 H6_DY_Z = 0.6126755422525321 H6_DZ_X = 0.9258552223325296 H6_DZ_Y = 0.3778612044397107 H6_DZ_Z = 0.00360797158006676 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 18 H7_INID2 = 3 H7_OUTID2 = 16 H7_INID2_ORIG = 2074 H7_OUTID2_ORIG = 2435 H7_INSEQ_CHAR = A H7_OUTSEQ_CHAR = A # Position: H7_P_X = 305.31568219200733 H7_P_Y = 96.4401231402519 H7_P_Z = 96.81462363270575 # Orientation: H7_DX_X = -0.8185839880696903 H7_DX_Y = 0.5621890960025695 H7_DX_Z = 0.11774410733345064 H7_DY_X = -0.11202996976351187 H7_DY_Y = 0.04478574356255649 H7_DY_Z = -0.9926950806004413 H7_DZ_X = -0.5633556073660202 H7_DZ_Y = -0.8257951667994661 H7_DZ_Z = 0.026321134852437922 ############# END of Description of junction: j29