############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 63:128:169 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 68 S1_NAME_ID3 = 77 S1_NUM_ID5_ORIG = 68 S1_NUM_ID3_ORIG = 77 S1_NAME2_ID5 = 70 S1_NAME2_ID3 = 75 S1_NUM2_ID5_ORIG = 70 S1_NUM2_ID3_ORIG = 75 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 54 S2_NAME_ID3 = 59 S2_NUM_ID5_ORIG = 54 S2_NUM_ID3_ORIG = 59 S2_NAME2_ID5 = 56 S2_NAME2_ID3 = 57 S2_NUM2_ID5_ORIG = 56 S2_NUM2_ID3_ORIG = 57 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 109 S3_NAME_ID3 = 116 S3_NUM_ID5_ORIG = 109 S3_NUM_ID3_ORIG = 116 S3_NAME2_ID5 = 111 S3_NAME2_ID3 = 114 S3_NUM2_ID5_ORIG = 111 S3_NUM2_ID3_ORIG = 114 S3_SQ2 = AUGU S3_SQLEN2 = 4 S3_SQ = GGAUGUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 70 H1_OUTID2_ORIG = 57 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 334.334290091431 H1_P_Y = 75.4808434379143 H1_P_Z = 42.995047546426946 # Orientation: H1_DX_X = 0.3250418255219074 H1_DX_Y = 0.2861706976691778 H1_DX_Z = -0.9013623818736249 H1_DY_X = 0.8064924611371111 H1_DY_Y = -0.581633855774399 H1_DY_Z = 0.10616952456323503 H1_DZ_X = -0.49388027070369844 H1_DZ_Y = -0.7614515018125161 H1_DZ_Z = -0.4198498405347948 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 111 H2_OUTID2_ORIG = 75 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 356.51030824363943 H2_P_Y = 72.75051515232482 H2_P_Z = 43.05097182627294 # Orientation: H2_DX_X = 0.28902600045557847 H2_DX_Y = 0.35946410275977314 H2_DX_Z = -0.8872708323210716 H2_DY_X = 0.8063954181695294 H2_DY_Y = 0.40808513159839777 H2_DY_Z = 0.42801046123138775 H2_DZ_X = 0.5159364307895089 H2_DZ_Y = -0.8391972856220491 H2_DZ_Z = -0.17192299203064465 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 56 H3_OUTID2_ORIG = 114 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 343.7420612781158 H3_P_Y = 90.52822859953501 H3_P_Z = 49.27776405207273 # Orientation: H3_DX_X = -0.8354345805482808 H3_DX_Y = 0.45583633315509076 H3_DX_Z = -0.3070216588448389 H3_DY_X = -0.42844698927683567 H3_DY_Y = -0.19030387747335453 H3_DY_Z = 0.8832992763487368 H3_DZ_X = 0.3442124910628763 H3_DZ_Y = 0.869481265809867 H3_DZ_Z = 0.3542881445969712 ############# END of Description of junction: j1