#############  Start of Description of junction: j40
# Number of strands:
NUM_STRANDS = 3
LILLEY = HS3HS5HS9
FINGERPRINT = 55:75:116
LOOP_LENGTH_SUM = 17
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  1343
S1_NAME_ID3 = 1349
S1_NUM_ID5_ORIG =  1343
S1_NUM_ID3_ORIG = 1349
S1_NAME2_ID5 =  1344
S1_NAME2_ID3 = 1348
S1_NUM2_ID5_ORIG =  1344
S1_NUM2_ID3_ORIG = 1348
S1_SQ2 = CUAGU
S1_SQLEN2 = 5
S1_SQ = GCUAGUA
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  932
S2_NAME_ID3 = 940
S2_NUM_ID5_ORIG =  932
S2_NUM_ID3_ORIG = 940
S2_NAME2_ID5 =  933
S2_NAME2_ID3 = 939
S2_NUM2_ID5_ORIG =  933
S2_NUM2_ID3_ORIG = 939
S2_SQ2 = GCACAAG
S2_SQLEN2 = 7
S2_SQ = CGCACAAGC
S2_SQLEN = 9
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  1373
S3_NAME_ID3 = 1385
S3_NUM_ID5_ORIG =  1373
S3_NUM_ID3_ORIG = 1385
S3_NAME2_ID5 =  1374
S3_NAME2_ID3 = 1384
S3_NUM2_ID5_ORIG =  1374
S3_NUM2_ID3_ORIG = 1384
S3_SQ2 = AAUACGUUCCC
S3_SQLEN2 = 11
S3_SQ = GAAUACGUUCCCG
S3_SQLEN = 13
S3_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 9
H1_INID2 = 2
H1_OUTID2 = 8
H1_INID2_ORIG = 1344
H1_OUTID2_ORIG = 939
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = -84.61932057878381
H1_P_Y = -11.156646444988176
H1_P_Z = 22.447264013673585
# Orientation:
H1_DX_X = -0.7135584261074683
H1_DX_Y = -0.5963583305531461
H1_DX_Z = 0.3676834428022211
H1_DY_X = -0.6487122694895504
H1_DY_Y = 0.3642087256879236
H1_DY_Z = -0.6682248091372358
H1_DZ_X = 0.2645879134517344
H1_DZ_Y = -0.7153382037278906
H1_DZ_Z = -0.6467491711186142
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 2
H2_OUTID2 = 6
H2_INID2_ORIG = 1374
H2_OUTID2_ORIG = 1348
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -106.87044482267206
H2_P_Y = -10.013474731352469
H2_P_Z = 22.354860513650664
# Orientation:
H2_DX_X = 0.9683077095492081
H2_DX_Y = 0.24740375242995505
H2_DX_Z = 0.03422810119097974
H2_DY_X = 0.24953353467870443
H2_DY_Y = -0.9641388624555773
H2_DY_Z = -0.09038400839538596
H2_DZ_X = 0.010639299709609418
H2_DZ_Y = 0.09606059122473631
H2_DZ_Z = -0.9953186264283644
## Properties of helix 3
H3_INID = 1
H3_OUTID = 13
H3_INID2 = 2
H3_OUTID2 = 12
H3_INID2_ORIG = 933
H3_OUTID2_ORIG = 1384
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = -76.39535988299545
H3_P_Y = 8.654911527333278
H3_P_Z = 31.166946048005986
# Orientation:
H3_DX_X = -0.18210213090695504
H3_DX_Y = -0.10514553319077535
H3_DX_Z = -0.9776416678769237
H3_DY_X = -0.9011322876303041
H3_DY_Y = 0.4156876593111587
H3_DY_Z = 0.12314369690162152
H3_DZ_X = 0.39344556689501076
H3_DZ_Y = 0.9034092022701774
H3_DZ_Z = -0.17044764341058993
#############  END of Description of junction: j40