############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS9HS9 FINGERPRINT = 51 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 240 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 240 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 242 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 242 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = GAUUAGCUAGU S1_SQLEN2 = 11 S1_SQ = GGGAUUAGCUAGUAG S1_SQLEN = 15 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 272 S2_NAME_ID3 = 286 S2_NUM_ID5_ORIG = 272 S2_NUM_ID3_ORIG = 286 S2_NAME2_ID5 = 274 S2_NAME2_ID3 = 284 S2_NUM2_ID5_ORIG = 274 S2_NUM2_ID3_ORIG = 284 S2_SQ2 = AGGCGACGAUC S2_SQLEN2 = 11 S2_SQ = CUAGGCGACGAUCCC S2_SQLEN = 15 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 242 H1_OUTID2_ORIG = 284 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -19.587432379668115 H1_P_Y = 64.23133879213943 H1_P_Z = 4.495304083950607 # Orientation: H1_DX_X = -0.22652516258358446 H1_DX_Y = -0.914426663871474 H1_DX_Z = -0.33542544196491697 H1_DY_X = -0.9712268810243287 H1_DY_Y = 0.238055409272107 H1_DY_Z = 0.0069258712121342825 H1_DZ_X = 0.07351663956032795 H1_DZ_Y = 0.3273430899181591 H1_DZ_Z = -0.9420412969666438 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 3 H2_OUTID2 = 13 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 7.562004448343652 H2_P_Y = 70.85472593149726 H2_P_Z = 15.7855654007614 # Orientation: H2_DX_X = -0.6768086326104736 H2_DX_Y = 0.19792642916642933 H2_DX_Z = 0.7090523277314382 H2_DY_X = 0.7310372687740658 H2_DY_Y = 0.29412270243632577 H2_DY_Z = 0.6156917634457315 H2_DZ_X = -0.08668671459513799 H2_DZ_Y = 0.9350491776099119 H2_DZ_Z = -0.34375638025165145 ############# END of Description of junction: j9