#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 168
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  6
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  6
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = UACG
S1_SQLEN2 = 4
S1_SQ = UGUACGUC
S1_SQLEN = 8
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  27
S2_NAME_ID3 = 33
S2_NUM_ID5_ORIG =  27
S2_NUM_ID3_ORIG = 33
S2_NAME2_ID5 =  29
S2_NAME2_ID3 = 31
S2_NUM2_ID5_ORIG =  29
S2_NUM2_ID3_ORIG = 31
S2_SQ2 = CUG
S2_SQLEN2 = 3
S2_SQ = GUCUGCG
S2_SQLEN = 7
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 6
H1_OUTID2_ORIG = 31
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 13.846317620213437
H1_P_Y = 3.264420131417725
H1_P_Z = 6.406328064592989
# Orientation:
H1_DX_X = 0.4615861236694645
H1_DX_Y = 0.08090183283135133
H1_DX_Z = -0.8833986324872409
H1_DY_X = -0.29518540335012844
H1_DY_Y = 0.9530911822048931
H1_DY_Z = -0.06695353651826252
H1_DZ_X = 0.836542783176581
H1_DZ_Y = 0.29167120503712374
H1_DZ_Z = 0.46381470445358985
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 29
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -4.106229757181733
H2_P_Y = -3.4446081331514344
H2_P_Z = -1.602983375859825
# Orientation:
H2_DX_X = 0.18149759084443584
H2_DX_Y = -0.868005207548527
H2_DX_Z = 0.4621964779033958
H2_DY_X = -0.39224939567261163
H2_DY_Y = 0.36709475724196006
H2_DY_Z = 0.8434345563230965
H2_DZ_X = -0.9017754909688653
H2_DZ_Y = -0.3343776291472036
H2_DZ_Z = -0.2738477040505505
#############  END of Description of junction: j1