############# Start of Description of junction: k1 # Number of strands: NUM_STRANDS = 2 LILLEY = HS9HS9 FINGERPRINT = 164 LOOP_LENGTH_SUM = 18 KISSING_LOOP = TRUE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 5 S1_NAME_ID3 = 19 S1_NUM_ID5_ORIG = 5 S1_NUM_ID3_ORIG = 19 S1_NAME2_ID5 = 7 S1_NAME2_ID3 = 17 S1_NUM2_ID5_ORIG = 7 S1_NUM2_ID3_ORIG = 17 S1_SQ2 = GAAGUGCACAC S1_SQLEN2 = 11 S1_SQ = CUGAAGUGCACACAG S1_SQLEN = 15 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 5 S2_NAME_ID3 = 19 S2_NUM_ID5_ORIG = 5 S2_NUM_ID3_ORIG = 19 S2_NAME2_ID5 = 7 S2_NAME2_ID3 = 17 S2_NUM2_ID5_ORIG = 7 S2_NUM2_ID3_ORIG = 17 S2_SQ2 = GAAGUGCACAC S2_SQLEN2 = 11 S2_SQ = CUGAAGUGCACACAG S2_SQLEN = 15 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 7 H1_OUTID2_ORIG = 17 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -3.7245094729239767 H1_P_Y = 38.042747678419154 H1_P_Z = 10.688262381354159 # Orientation: H1_DX_X = -0.1155762123636328 H1_DX_Y = -0.12941437354370322 H1_DX_Z = 0.984831995345381 H1_DY_X = 0.20104886229831376 H1_DY_Y = 0.9679066885595518 H1_DY_Z = 0.15078460534892812 H1_DZ_X = -0.9727391706435129 H1_DZ_Y = 0.21542646578814129 H1_DZ_Z = -0.08584837641912735 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 3 H2_OUTID2 = 13 H2_INID2_ORIG = 7 H2_OUTID2_ORIG = 17 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 33.317365183303934 H2_P_Y = 26.07375923767082 H2_P_Z = 9.068062258922849 # Orientation: H2_DX_X = 0.15734217746283718 H2_DX_Y = -0.17943295140389637 H2_DX_Z = 0.9711062017831722 H2_DY_X = -0.2546092256536099 H2_DY_Y = -0.9574809560232644 H2_DY_Z = -0.1356626738083868 H2_DZ_X = 0.9541580484402559 H2_DZ_Y = -0.22590713756599712 H2_DZ_Z = -0.1963374233135955 ############# END of Description of junction: k1