#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 164
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 10
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 10
S1_NAME2_ID5 =  6
S1_NAME2_ID3 = 8
S1_NUM2_ID5_ORIG =  6
S1_NUM2_ID3_ORIG = 8
S1_SQ2 = CAC
S1_SQLEN2 = 3
S1_SQ = GUCACAC
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 43
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 43
S2_NAME2_ID5 =  38
S2_NAME2_ID3 = 41
S2_NUM2_ID5_ORIG =  38
S2_NUM2_ID3_ORIG = 41
S2_SQ2 = GAAG
S2_SQLEN2 = 4
S2_SQ = GUGAAGUC
S2_SQLEN = 8
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 6
H1_OUTID2_ORIG = 41
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 21.413492063783565
H1_P_Y = 1.9134379892547173
H1_P_Z = 7.970052774593874
# Orientation:
H1_DX_X = 0.6582000220037649
H1_DX_Y = 0.6310217725401119
H1_DX_Z = 0.41059012849139087
H1_DY_X = -0.30217401932162247
H1_DY_Y = -0.27808899361924566
H1_DY_Z = 0.9117880091747494
H1_DZ_X = 0.6895386813524382
H1_DZ_Y = -0.7242085571216155
H1_DZ_Z = 0.007640203568707982
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 38
H2_OUTID2_ORIG = 8
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 7.821185922669308
H2_P_Y = 18.580777745859518
H2_P_Z = 11.375487253642365
# Orientation:
H2_DX_X = -0.13772196563982497
H2_DX_Y = 0.15054924351892396
H2_DX_Z = -0.9789625046222046
H2_DY_X = -0.8355809542746204
H2_DY_Y = -0.5483619390162922
H2_DY_Z = 0.033221268666444814
H2_DZ_X = -0.531824340392407
H2_DZ_Y = 0.8225777222330883
H2_DZ_Z = 0.20131756468825301
#############  END of Description of junction: j1