############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 155 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 13 S1_NAME_ID3 = 20 S1_NUM_ID5_ORIG = 13 S1_NUM_ID3_ORIG = 20 S1_NAME2_ID5 = 15 S1_NAME2_ID3 = 18 S1_NUM2_ID5_ORIG = 15 S1_NUM2_ID3_ORIG = 18 S1_SQ2 = GAAG S1_SQLEN2 = 4 S1_SQ = GUGAAGUC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 27 S2_NAME_ID3 = 33 S2_NUM_ID5_ORIG = 27 S2_NUM_ID3_ORIG = 33 S2_NAME2_ID5 = 29 S2_NAME2_ID3 = 31 S2_NUM2_ID5_ORIG = 29 S2_NUM2_ID3_ORIG = 31 S2_SQ2 = CAC S2_SQLEN2 = 3 S2_SQ = GUCACAC S2_SQLEN = 7 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 15 H1_OUTID2_ORIG = 31 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = B # Position: H1_P_X = 5.927033011980774 H1_P_Y = 2.003810343039648 H1_P_Z = 35.22855706034621 # Orientation: H1_DX_X = 0.2426113915199446 H1_DX_Y = 0.14574929925254487 H1_DX_Z = -0.9591125348321512 H1_DY_X = -0.7964925016483155 H1_DY_Y = 0.5943429837677439 H1_DY_Z = -0.11115805172845938 H1_DZ_X = 0.5538405975754825 H1_DZ_Y = 0.7908941518392005 H1_DZ_Z = 0.26028260230715716 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 29 H2_OUTID2_ORIG = 18 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = A # Position: H2_P_X = -3.702197734917184 H2_P_Y = -15.440480290514875 H2_P_Z = 33.82354581457826 # Orientation: H2_DX_X = 0.7902701507345395 H2_DX_Y = -0.28191501032999966 H2_DX_Z = 0.5440560778161085 H2_DY_X = -0.4480213996581104 H2_DY_Y = 0.339886028541569 H2_DY_Z = 0.82689437841276 H2_DZ_X = -0.4180309968248719 H2_DZ_Y = -0.8972187105454683 H2_DZ_Z = 0.14229782549543302 ############# END of Description of junction: j2