############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 161 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 13 S1_NAME_ID3 = 20 S1_NUM_ID5_ORIG = 13 S1_NUM_ID3_ORIG = 20 S1_NAME2_ID5 = 15 S1_NAME2_ID3 = 18 S1_NUM2_ID5_ORIG = 15 S1_NUM2_ID3_ORIG = 18 S1_SQ2 = GAAG S1_SQLEN2 = 4 S1_SQ = GUGAAGUC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 27 S2_NAME_ID3 = 33 S2_NUM_ID5_ORIG = 27 S2_NUM_ID3_ORIG = 33 S2_NAME2_ID5 = 29 S2_NAME2_ID3 = 31 S2_NUM2_ID5_ORIG = 29 S2_NUM2_ID3_ORIG = 31 S2_SQ2 = CAC S2_SQLEN2 = 3 S2_SQ = GUCACAC S2_SQLEN = 7 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 15 H1_OUTID2_ORIG = 31 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = B # Position: H1_P_X = 13.625398756276699 H1_P_Y = -2.609161198643694 H1_P_Z = 12.802560874469021 # Orientation: H1_DX_X = 0.14198251343500168 H1_DX_Y = 0.289229036146732 H1_DX_Z = 0.9466718177532876 H1_DY_X = 0.5585880030576238 H1_DY_Y = -0.8129498151790497 H1_DY_Z = 0.1645966003307695 H1_DZ_X = 0.8172027953444463 H1_DZ_Y = 0.5054296812119201 H1_DZ_Z = -0.2769845277831262 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 29 H2_OUTID2_ORIG = 18 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = A # Position: H2_P_X = -4.946174396261237 H2_P_Y = -11.624110686838858 H2_P_Z = 15.71318892025081 # Orientation: H2_DX_X = -0.3127745351925961 H2_DX_Y = 0.749151045193722 H2_DX_Z = -0.5839047881463344 H2_DY_X = 0.23414681594694287 H2_DY_Y = -0.5349630773237823 H2_DY_Z = -0.8117818515353594 H2_DZ_X = -0.9205147248778607 H2_DZ_Y = -0.39062413825239517 H2_DZ_Z = -0.008088504040287603 ############# END of Description of junction: j2