#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS2
FINGERPRINT = 154
LOOP_LENGTH_SUM = 2
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 9
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 9
S1_NAME2_ID5 =  6
S1_NAME2_ID3 = 7
S1_NUM2_ID5_ORIG =  6
S1_NUM2_ID3_ORIG = 7
S1_SQ2 = GG
S1_SQLEN2 = 2
S1_SQ = UCGGCU
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  29
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  29
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  31
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  31
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = AGGC
S2_SQLEN2 = 4
S2_SQ = AGAGGCGA
S2_SQLEN = 8
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 6
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = -39.744423298183435
H1_P_Y = -8.871480752905109
H1_P_Z = 2.9793503790564277
# Orientation:
H1_DX_X = 0.11804079502698528
H1_DX_Y = 0.7185759626931603
H1_DX_Z = 0.6853575392078199
H1_DY_X = -0.4214743736526998
H1_DY_Y = 0.6611847798188215
H1_DY_Z = -0.6206400239188579
H1_DZ_X = -0.8991249763316915
H1_DZ_Y = -0.21559979771682336
H1_DZ_Z = 0.3809081308675393
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 3
H2_OUTID2 = 4
H2_INID2_ORIG = 31
H2_OUTID2_ORIG = 7
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -23.001871702347
H2_P_Y = 0.7766572378096059
H2_P_Z = -2.84363918831601
# Orientation:
H2_DX_X = 0.3741672568990815
H2_DX_Y = -0.8268157697072178
H2_DX_Z = 0.419969697511712
H2_DY_X = 0.19936420081947404
H2_DY_Y = -0.3705592871020893
H2_DY_Z = -0.9071602560595373
H2_DZ_X = 0.9056780770760824
H2_DZ_Y = 0.4231565876904806
H2_DZ_Z = 0.0261863131791511
#############  END of Description of junction: j1