############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS2 FINGERPRINT = 155 LOOP_LENGTH_SUM = 2 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 29 S1_NAME_ID3 = 36 S1_NUM_ID5_ORIG = 29 S1_NUM_ID3_ORIG = 36 S1_NAME2_ID5 = 31 S1_NAME2_ID3 = 34 S1_NUM2_ID5_ORIG = 31 S1_NUM2_ID3_ORIG = 34 S1_SQ2 = AGGC S1_SQLEN2 = 4 S1_SQ = AGAGGCGA S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 4 S2_NAME_ID3 = 9 S2_NUM_ID5_ORIG = 4 S2_NUM_ID3_ORIG = 9 S2_NAME2_ID5 = 6 S2_NAME2_ID3 = 7 S2_NUM2_ID5_ORIG = 6 S2_NUM2_ID3_ORIG = 7 S2_SQ2 = GG S2_SQLEN2 = 2 S2_SQ = UCGGCU S2_SQLEN = 6 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 31 H1_OUTID2_ORIG = 7 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = B # Position: H1_P_X = 23.9948859586992 H1_P_Y = 1.0657865563290478 H1_P_Z = 2.6707995701783407 # Orientation: H1_DX_X = -0.4558745292568567 H1_DX_Y = -0.8868961270172079 H1_DX_Z = -0.07479086479455743 H1_DY_X = 0.025716433693375507 H1_DY_Y = -0.0971206341965507 H1_DY_Z = 0.9949403235628527 H1_DZ_X = -0.8896724558020992 H1_DZ_Y = 0.45164459732751827 H1_DZ_Z = 0.0670826288388291 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 6 H2_OUTID2_ORIG = 34 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = A # Position: H2_P_X = 39.544438258519676 H2_P_Y = -9.33320519717421 H2_P_Z = -3.205520622232007 # Orientation: H2_DX_X = -0.29508186552276783 H2_DX_Y = 0.48712646970203544 H2_DX_Z = -0.8219698870124352 H2_DY_X = 0.46586112896675047 H2_DY_Y = 0.8244433396487043 H2_DY_Z = 0.32135119141947577 H2_DZ_X = 0.8342062701499131 H2_DZ_Y = -0.28809891048826586 H2_DZ_Z = -0.4702115658063377 ############# END of Description of junction: j3