############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS1HS2HS5 FINGERPRINT = 73:89:97:102:165:174 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 24 S1_NAME_ID3 = 28 S1_NUM_ID5_ORIG = 24 S1_NUM_ID3_ORIG = 28 S1_NAME2_ID5 = 25 S1_NAME2_ID3 = 27 S1_NUM2_ID5_ORIG = 25 S1_NUM2_ID3_ORIG = 27 S1_SQ2 = CGG S1_SQLEN2 = 3 S1_SQ = GCGGG S1_SQLEN = 5 S1_CHAR = D ## Properties of strand 2 S2_NAME_ID5 = 6 S2_NAME_ID3 = 11 S2_NUM_ID5_ORIG = 6 S2_NUM_ID3_ORIG = 11 S2_NAME2_ID5 = 7 S2_NAME2_ID3 = 10 S2_NUM2_ID5_ORIG = 7 S2_NUM2_ID3_ORIG = 10 S2_SQ2 = GUAG S2_SQLEN2 = 4 S2_SQ = CGUAGC S2_SQLEN = 6 S2_CHAR = D ## Properties of strand 3 S3_NAME_ID5 = 42 S3_NAME_ID3 = 50 S3_NUM_ID5_ORIG = 42 S3_NUM_ID3_ORIG = 50 S3_NAME2_ID5 = 43 S3_NAME2_ID3 = 49 S3_NUM2_ID5_ORIG = 43 S3_NUM2_ID3_ORIG = 49 S3_SQ2 = CAGGUCG S3_SQLEN2 = 7 S3_SQ = CCAGGUCGG S3_SQLEN = 9 S3_CHAR = D ## Properties of strand 4 S4_NAME_ID5 = 64 S4_NAME_ID3 = 67 S4_NUM_ID5_ORIG = 64 S4_NUM_ID3_ORIG = 67 S4_NAME2_ID5 = 65 S4_NAME2_ID3 = 66 S4_NUM2_ID5_ORIG = 65 S4_NUM2_ID3_ORIG = 66 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = CCCG S4_SQLEN = 4 S4_CHAR = D ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 25 H1_OUTID2_ORIG = 10 H1_INSEQ_CHAR = D H1_OUTSEQ_CHAR = D # Position: H1_P_X = 69.42207992793045 H1_P_Y = 144.0954803096185 H1_P_Z = -8.751154094476956 # Orientation: H1_DX_X = 0.8127171928915544 H1_DX_Y = -0.31185064907464266 H1_DX_Z = 0.49217876533855787 H1_DY_X = -0.12220013808357066 H1_DY_Y = -0.9171540798737112 H1_DY_Z = -0.3793356297836574 H1_DZ_X = 0.5696998250226386 H1_DZ_Y = 0.2481482751153692 H1_DZ_Z = -0.7834950816223696 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 5 H2_INID2 = 2 H2_OUTID2 = 4 H2_INID2_ORIG = 43 H2_OUTID2_ORIG = 27 H2_INSEQ_CHAR = D H2_OUTSEQ_CHAR = D # Position: H2_P_X = 59.205363075552256 H2_P_Y = 135.78563998027798 H2_P_Z = 0.32686407831300635 # Orientation: H2_DX_X = 0.2711025809170735 H2_DX_Y = 0.6917334056676339 H2_DX_Z = 0.6693342110661418 H2_DY_X = -0.8227571480322311 H2_DY_Y = 0.5274391115747221 H2_DY_Z = -0.21184583768181187 H2_DZ_X = -0.49957388440746087 H2_DZ_Y = -0.4932675532251096 H2_DZ_Z = 0.712118708470266 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 2 H3_OUTID2 = 8 H3_INID2_ORIG = 65 H3_OUTID2_ORIG = 49 H3_INSEQ_CHAR = D H3_OUTSEQ_CHAR = D # Position: H3_P_X = 80.63790102170714 H3_P_Y = 153.9636923804291 H3_P_Z = -23.232251875130363 # Orientation: H3_DX_X = 0.08876933182948221 H3_DX_Y = 0.3832216838929128 H3_DX_Z = 0.9193808496596105 H3_DY_X = 0.5778884333256116 H3_DY_Y = 0.7319786607688457 H3_DY_Z = -0.36090469490924093 H3_DZ_X = -0.8112736679783268 H3_DZ_Y = 0.5633368274605743 H3_DZ_Z = -0.15648212189137922 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 4 H4_INID2 = 2 H4_OUTID2 = 3 H4_INID2_ORIG = 7 H4_OUTID2_ORIG = 66 H4_INSEQ_CHAR = D H4_OUTSEQ_CHAR = D # Position: H4_P_X = 90.38379239079548 H4_P_Y = 147.2973379932466 H4_P_Z = -22.038657336871136 # Orientation: H4_DX_X = 0.10414450041731982 H4_DX_Y = 0.3139357177060731 H4_DX_Z = 0.9437151520354057 H4_DY_X = -0.5135028537822564 H4_DY_Y = -0.7956450339807191 H4_DY_Z = 0.3213468516405342 H4_DZ_X = 0.8517445287116914 H4_DZ_Y = -0.5180669310525161 H4_DZ_Z = 0.07834483237280665 ############# END of Description of junction: j2