############# Start of Description of junction: k1 # Number of strands: NUM_STRANDS = 2 LILLEY = HS9HS9 FINGERPRINT = 179 LOOP_LENGTH_SUM = 18 KISSING_LOOP = TRUE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 5 S1_NAME_ID3 = 19 S1_NUM_ID5_ORIG = 5 S1_NUM_ID3_ORIG = 19 S1_NAME2_ID5 = 7 S1_NAME2_ID3 = 17 S1_NUM2_ID5_ORIG = 7 S1_NUM2_ID3_ORIG = 17 S1_SQ2 = GAGGUGCACAC S1_SQLEN2 = 11 S1_SQ = CUGAGGUGCACACAG S1_SQLEN = 15 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 5 S2_NAME_ID3 = 19 S2_NUM_ID5_ORIG = 5 S2_NUM_ID3_ORIG = 19 S2_NAME2_ID5 = 7 S2_NAME2_ID3 = 17 S2_NUM2_ID5_ORIG = 7 S2_NUM2_ID3_ORIG = 17 S2_SQ2 = GAGGUGCACAC S2_SQLEN2 = 11 S2_SQ = CUGAGGUGCACACAG S2_SQLEN = 15 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 7 H1_OUTID2_ORIG = 17 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 25.15098253860904 H1_P_Y = 75.04060868149287 H1_P_Z = 56.69176269954729 # Orientation: H1_DX_X = -0.018056454264254285 H1_DX_Y = -0.0023535679484183447 H1_DX_Z = 0.9998341988436437 H1_DY_X = 0.9887211881122795 H1_DY_Y = -0.14874126912950203 H1_DY_Z = 0.017505628683096575 H1_DZ_X = 0.14867540696850057 H1_DZ_Y = 0.9888733465796662 H1_DZ_Z = 0.005012762421507944 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 3 H2_OUTID2 = 13 H2_INID2_ORIG = 7 H2_OUTID2_ORIG = 17 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 11.374684973856798 H2_P_Y = 38.16981326652192 H2_P_Z = 56.54512559154097 # Orientation: H2_DX_X = -0.20772080202501364 H2_DX_Y = 0.04412930560794592 H2_DX_Z = 0.9771922394251007 H2_DY_X = -0.9651162512472347 H2_DY_Y = 0.15352451725349425 H2_DY_Z = -0.212086878850549 H2_DZ_X = -0.15938221351382786 H2_DZ_Y = -0.9871589674356613 H2_DZ_Z = 0.010699674144085236 ############# END of Description of junction: k1