############# Start of Description of junction: j11 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 172 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 395 S1_NAME_ID3 = 401 S1_NUM_ID5_ORIG = 395 S1_NUM_ID3_ORIG = 401 S1_NAME2_ID5 = 396 S1_NAME2_ID3 = 400 S1_NUM2_ID5_ORIG = 396 S1_NUM2_ID3_ORIG = 400 S1_SQ2 = GACGC S1_SQLEN2 = 5 S1_SQ = CGACGCC S1_SQLEN = 7 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 41 S2_NAME_ID3 = 46 S2_NUM_ID5_ORIG = 41 S2_NUM_ID3_ORIG = 46 S2_NAME2_ID5 = 42 S2_NAME2_ID3 = 45 S2_NUM2_ID5_ORIG = 42 S2_NUM2_ID3_ORIG = 45 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGCGUG S2_SQLEN = 6 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 396 H1_OUTID2_ORIG = 45 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -160.27892262047416 H1_P_Y = 73.86320105732409 H1_P_Z = -97.88123775543721 # Orientation: H1_DX_X = -0.06936763499692233 H1_DX_Y = -0.9902324430570957 H1_DX_Z = 0.12094560732883508 H1_DY_X = 0.7057027087084862 H1_DY_Y = -0.13440074199833418 H1_DY_Z = -0.6956436785249878 H1_DZ_X = 0.7051041186494444 H1_DZ_Y = 0.03709648591852499 H1_DZ_Z = 0.7081327789306755 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 42 H2_OUTID2_ORIG = 400 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -172.82566580758026 H2_P_Y = 68.6468125126867 H2_P_Z = -110.37157335578067 # Orientation: H2_DX_X = -0.6887595421086417 H2_DX_Y = 0.049921209016602575 H2_DX_Z = 0.7232690827379713 H2_DY_X = -0.08459235350136396 H2_DY_Y = 0.9852784158308197 H2_DY_Z = -0.1485616943461281 H2_DZ_X = -0.7200377954548003 H2_DZ_Y = -0.16350631849630304 H2_DZ_Z = -0.6743969579768248 ############# END of Description of junction: j11