############# Start of Description of junction: j12 # Number of strands: NUM_STRANDS = 2 LILLEY = HS3HS5 FINGERPRINT = 146 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 603 S1_NAME_ID3 = 613 S1_NUM_ID5_ORIG = 603 S1_NUM_ID3_ORIG = 613 S1_NAME2_ID5 = 605 S1_NAME2_ID3 = 611 S1_NUM2_ID5_ORIG = 605 S1_NUM2_ID3_ORIG = 611 S1_SQ2 = UGAAAUC S1_SQLEN2 = 7 S1_SQ = UGUGAAAUCCC S1_SQLEN = 11 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 627 S2_NAME_ID3 = 635 S2_NUM_ID5_ORIG = 627 S2_NUM_ID3_ORIG = 635 S2_NAME2_ID5 = 629 S2_NAME2_ID3 = 633 S2_NUM2_ID5_ORIG = 629 S2_NUM2_ID3_ORIG = 633 S2_SQ2 = AACUG S2_SQLEN2 = 5 S2_SQ = GGAACUGCA S2_SQLEN = 9 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 605 H1_OUTID2_ORIG = 633 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 44.93212913709035 H1_P_Y = -5.2909107673567775 H1_P_Z = 14.926043890379779 # Orientation: H1_DX_X = -0.1434437559103685 H1_DX_Y = -0.7403690745406895 H1_DX_Z = -0.6567172316561294 H1_DY_X = -0.6902022533385761 H1_DY_Y = -0.4007259350842505 H1_DY_Z = 0.6025276544999496 H1_DZ_X = -0.7092564686886433 H1_DZ_Y = 0.5396965428966709 H1_DZ_Z = -0.453522770330995 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 11 H2_INID2 = 3 H2_OUTID2 = 9 H2_INID2_ORIG = 629 H2_OUTID2_ORIG = 611 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 69.54517505208082 H2_P_Y = -14.787288069390442 H2_P_Z = 28.355685887556568 # Orientation: H2_DX_X = -0.04334582884473548 H2_DX_Y = 0.9989439438353269 H2_DX_Z = 0.015236016424417187 H2_DY_X = -0.580832296238853 H2_DY_Y = -0.03760560082536024 H2_DY_Z = 0.8131541443247237 H2_DZ_X = 0.8128683674296013 H2_DZ_Y = 0.02639726995896119 H2_DZ_Z = 0.581848950648741 ############# END of Description of junction: j12