############# Start of Description of junction: j79 # Number of strands: NUM_STRANDS = 6 LILLEY = 2HS2HS6HS9HS2HS2 FINGERPRINT = 10:29:42:64:65:71:100:104:118:140:145:147:155:162:172 LOOP_LENGTH_SUM = 21 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2221 S1_NAME_ID3 = 2226 S1_NUM_ID5_ORIG = 2221 S1_NUM_ID3_ORIG = 2226 S1_NAME2_ID5 = 2222 S1_NAME2_ID3 = 2225 S1_NUM2_ID5_ORIG = 2222 S1_NUM2_ID3_ORIG = 2225 S1_SQ2 = UUUG S1_SQLEN2 = 4 S1_SQ = GUUUGA S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2056 S2_NAME_ID3 = 2061 S2_NUM_ID5_ORIG = 2056 S2_NUM_ID3_ORIG = 2061 S2_NAME2_ID5 = 2057 S2_NAME2_ID3 = 2060 S2_NUM2_ID5_ORIG = 2057 S2_NUM2_ID3_ORIG = 2060 S2_SQ2 = UUUA S2_SQLEN2 = 4 S2_SQ = CUUUAC S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2236 S3_NAME_ID3 = 2239 S3_NUM_ID5_ORIG = 2236 S3_NUM_ID3_ORIG = 2239 S3_NAME2_ID5 = 2237 S3_NAME2_ID3 = 2238 S3_NUM2_ID5_ORIG = 2237 S3_NUM2_ID3_ORIG = 2238 S3_SQ2 = CG S3_SQLEN2 = 2 S3_SQ = UCGC S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2259 S4_NAME_ID3 = 2264 S4_NUM_ID5_ORIG = 2259 S4_NUM_ID3_ORIG = 2264 S4_NAME2_ID5 = 2260 S4_NAME2_ID3 = 2263 S4_NUM2_ID5_ORIG = 2260 S4_NUM2_ID3_ORIG = 2263 S4_SQ2 = CGCC S4_SQLEN2 = 4 S4_SQ = GCGCCC S4_SQLEN = 6 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 2362 S5_NAME_ID3 = 2371 S5_NUM_ID5_ORIG = 2362 S5_NUM_ID3_ORIG = 2371 S5_NAME2_ID5 = 2363 S5_NAME2_ID3 = 2370 S5_NUM2_ID5_ORIG = 2363 S5_NUM2_ID3_ORIG = 2370 S5_SQ2 = GCUUAGUG S5_SQLEN2 = 8 S5_SQ = GGCUUAGUGA S5_SQLEN = 10 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 2403 S6_NAME_ID3 = 2415 S6_NUM_ID5_ORIG = 2403 S6_NUM_ID3_ORIG = 2415 S6_NAME2_ID5 = 2404 S6_NAME2_ID3 = 2414 S6_NUM2_ID5_ORIG = 2404 S6_NUM2_ID3_ORIG = 2414 S6_SQ2 = AACGGAUAAAA S6_SQLEN2 = 11 S6_SQ = CAACGGAUAAAAG S6_SQLEN = 13 S6_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 2222 H1_OUTID2_ORIG = 2060 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 56.52262343964772 H1_P_Y = 159.04546933136257 H1_P_Z = 101.52545614728363 # Orientation: H1_DX_X = 0.29380423591478433 H1_DX_Y = -0.18270233186768792 H1_DX_Z = -0.9382424680692338 H1_DY_X = -0.9412889796058863 H1_DY_Y = 0.11546519156323143 H1_DY_Z = -0.31724256714662147 H1_DZ_X = 0.1662953030937615 H1_DZ_Y = 0.9763645054319454 H1_DZ_Z = -0.1380515291533584 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 2237 H2_OUTID2_ORIG = 2225 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 64.8630030086601 H2_P_Y = 136.26437159858378 H2_P_Z = 90.98700682381045 # Orientation: H2_DX_X = -0.9145990831436208 H2_DX_Y = -0.07223577232949197 H2_DX_Z = -0.3978573994646979 H2_DY_X = 0.3350997546934451 H2_DY_Y = -0.6860710938627506 H2_DY_Z = -0.6457666827658386 H2_DZ_X = -0.22631100617789457 H2_DZ_Y = -0.7239395329459057 H2_DZ_Z = 0.6516861830059071 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2260 H3_OUTID2_ORIG = 2238 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 70.53784730243457 H3_P_Y = 129.44069789456 H3_P_Z = 73.620328013341 # Orientation: H3_DX_X = -0.6204154477255486 H3_DX_Y = 0.5601064280195089 H3_DX_Z = -0.5489676324836807 H3_DY_X = 0.6815312630002524 H3_DY_Y = 0.03868133309691757 H3_DY_Z = -0.7307659625510325 H3_DZ_X = -0.3880719131511654 H3_DZ_Y = -0.8275170957515456 H3_DZ_Z = -0.405728537894646 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 2363 H4_OUTID2_ORIG = 2263 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 72.61642105403126 H4_P_Y = 150.43876539695464 H4_P_Z = 56.18745117663955 # Orientation: H4_DX_X = 0.9501483590939444 H4_DX_Y = -0.30178253057806614 H4_DX_Z = -0.07839260136629633 H4_DY_X = -0.15202733879166885 H4_DY_Y = -0.22888446622184233 H4_DY_Z = -0.9615090167971729 H4_DZ_X = 0.2722237755432104 H4_DZ_Y = 0.9254940331305477 H4_DZ_Z = -0.26335339502038835 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 10 H5_INID2 = 2 H5_OUTID2 = 9 H5_INID2_ORIG = 2404 H5_OUTID2_ORIG = 2370 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 60.88036967602425 H5_P_Y = 153.28370344578715 H5_P_Z = 70.10795426155138 # Orientation: H5_DX_X = -0.5644300952903123 H5_DX_Y = -0.7810089160172708 H5_DX_Z = -0.26728961938711393 H5_DY_X = -0.15027439145335109 H5_DY_Y = -0.22117223644016804 H5_DY_Z = 0.9635872815170359 H5_DZ_X = -0.8116873011227241 H5_DZ_Y = 0.584044446022375 H5_DZ_Z = 0.0074706269153637095 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 13 H6_INID2 = 2 H6_OUTID2 = 12 H6_INID2_ORIG = 2057 H6_OUTID2_ORIG = 2414 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 53.555892088072284 H6_P_Y = 147.46610959070796 H6_P_Z = 101.14667963832846 # Orientation: H6_DX_X = 0.9827132153229883 H6_DX_Y = -0.1280613297406603 H6_DX_Z = -0.13369754019659297 H6_DY_X = 0.13213301807093103 H6_DY_Y = -0.02067436969602454 H6_DY_Z = 0.9910163651389041 H6_DZ_X = -0.1296749858879238 H6_DZ_Y = -0.9915507381181783 H6_DZ_Z = -0.0033958463219647683 ############# END of Description of junction: j79