############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 178 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 5 S1_NAME_ID3 = 12 S1_NUM_ID5_ORIG = 5 S1_NUM_ID3_ORIG = 12 S1_NAME2_ID5 = 7 S1_NAME2_ID3 = 10 S1_NUM2_ID5_ORIG = 7 S1_NUM2_ID3_ORIG = 10 S1_SQ2 = GAAG S1_SQLEN2 = 4 S1_SQ = GUGAAGUC S1_SQLEN = 8 S1_CHAR = E ## Properties of strand 2 S2_NAME_ID5 = 24 S2_NAME_ID3 = 30 S2_NUM_ID5_ORIG = 24 S2_NUM_ID3_ORIG = 30 S2_NAME2_ID5 = 26 S2_NAME2_ID3 = 28 S2_NUM2_ID5_ORIG = 26 S2_NUM2_ID3_ORIG = 28 S2_SQ2 = CAC S2_SQLEN2 = 3 S2_SQ = GUCACAC S2_SQLEN = 7 S2_CHAR = F ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 7 H1_OUTID2_ORIG = 28 H1_INSEQ_CHAR = E H1_OUTSEQ_CHAR = F # Position: H1_P_X = 31.695988999802335 H1_P_Y = 34.574473812723696 H1_P_Z = 17.928699025798668 # Orientation: H1_DX_X = 0.9806225265976956 H1_DX_Y = 0.03787822647426253 H1_DX_Z = -0.1922100421110109 H1_DY_X = 0.19077754425153515 H1_DY_Y = 0.038401684846142814 H1_DY_Z = 0.9808818681219158 H1_DZ_X = 0.04453525500663602 H1_DZ_Y = -0.9985442156259978 H1_DZ_Z = 0.030431242192072716 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 26 H2_OUTID2_ORIG = 10 H2_INSEQ_CHAR = F H2_OUTSEQ_CHAR = E # Position: H2_P_X = 32.6352871640919 H2_P_Y = 54.83011390267734 H2_P_Z = 16.460959598144377 # Orientation: H2_DX_X = -0.5430323199038156 H2_DX_Y = -0.04373391150210182 H2_DX_Z = -0.8385721462847435 H2_DY_X = -0.8396576742147843 H2_DY_Y = 0.01694239409813747 H2_DY_Z = 0.5428516790196376 H2_DZ_X = -0.009533607506938324 H2_DZ_Y = 0.9988995446324651 H2_DZ_Z = -0.04592178198800667 ############# END of Description of junction: j3