#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 2HS1HS2HS5
FINGERPRINT = 75:91:97:98:165:167
LOOP_LENGTH_SUM = 8
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  924
S1_NAME_ID3 = 928
S1_NUM_ID5_ORIG =  924
S1_NUM_ID3_ORIG = 928
S1_NAME2_ID5 =  925
S1_NAME2_ID3 = 927
S1_NUM2_ID5_ORIG =  925
S1_NUM2_ID3_ORIG = 927
S1_SQ2 = CAC
S1_SQLEN2 = 3
S1_SQ = GCACC
S1_SQLEN = 5
S1_CHAR = B
## Properties of strand 2
S2_NAME_ID5 =  906
S2_NAME_ID3 = 911
S2_NUM_ID5_ORIG =  906
S2_NUM_ID3_ORIG = 911
S2_NAME2_ID5 =  907
S2_NAME2_ID3 = 910
S2_NUM2_ID5_ORIG =  907
S2_NUM2_ID3_ORIG = 910
S2_SQ2 = AUCG
S2_SQLEN2 = 4
S2_SQ = UAUCGC
S2_SQLEN = 6
S2_CHAR = B
## Properties of strand 3
S3_NAME_ID5 =  942
S3_NAME_ID3 = 950
S3_NUM_ID5_ORIG =  942
S3_NUM_ID3_ORIG = 950
S3_NAME2_ID5 =  943
S3_NAME2_ID3 = 949
S3_NUM2_ID5_ORIG =  943
S3_NUM2_ID3_ORIG = 949
S3_SQ2 = GCAUUCC
S3_SQLEN2 = 7
S3_SQ = GGCAUUCCG
S3_SQLEN = 9
S3_CHAR = B
## Properties of strand 4
S4_NAME_ID5 =  964
S4_NAME_ID3 = 967
S4_NUM_ID5_ORIG =  964
S4_NUM_ID3_ORIG = 967
S4_NAME2_ID5 =  965
S4_NAME2_ID3 = 966
S4_NUM2_ID5_ORIG =  965
S4_NUM2_ID3_ORIG = 966
S4_SQ2 = GU
S4_SQLEN2 = 2
S4_SQ = CGUA
S4_SQLEN = 4
S4_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 925
H1_OUTID2_ORIG = 910
H1_INSEQ_CHAR = B
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 18.431868647393653
H1_P_Y = 20.103352226371875
H1_P_Z = 29.974072397783416
# Orientation:
H1_DX_X = 0.977874772500364
H1_DX_Y = -0.10490361187074981
H1_DX_Z = 0.1809866335501873
H1_DY_X = 0.17633006215639213
H1_DY_Y = -0.05215984966394416
H1_DY_Z = -0.9829481467824017
H1_DZ_X = 0.11255504647629522
H1_DZ_Y = 0.9931135797578783
H1_DZ_Z = -0.03250814072218233
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 943
H2_OUTID2_ORIG = 927
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = B
# Position:
H2_P_X = 15.747345349610237
H2_P_Y = 4.283201744313381
H2_P_Z = 25.653232389217692
# Orientation:
H2_DX_X = 0.16934416806282293
H2_DX_Y = 0.0063650867085041085
H2_DX_Z = 0.9855364216579225
H2_DY_X = -0.9752363353616449
H2_DY_Y = -0.1432550211682626
H2_DY_Z = 0.16849952255266487
H2_DZ_X = 0.14225555501808884
H2_DZ_Y = -0.9896653396887629
H2_DZ_Z = -0.01805193854470133
## Properties of helix 3
H3_INID = 1
H3_OUTID = 9
H3_INID2 = 2
H3_OUTID2 = 8
H3_INID2_ORIG = 965
H3_OUTID2_ORIG = 949
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = 20.198862011258772
H3_P_Y = 39.19941949917279
H3_P_Z = 37.25498966506713
# Orientation:
H3_DX_X = 0.0904591119638738
H3_DX_Y = -0.6950988910940055
H3_DX_Z = 0.7132003089333239
H3_DY_X = 0.0623711603336794
H3_DY_Y = 0.7186846625031649
H3_DY_Z = 0.6925331719429337
H3_DZ_X = -0.9939451631862468
H3_DZ_Y = -0.018162804920969222
H3_DZ_Z = 0.10836570073627882
## Properties of helix 4
H4_INID = 1
H4_OUTID = 4
H4_INID2 = 2
H4_OUTID2 = 3
H4_INID2_ORIG = 907
H4_OUTID2_ORIG = 966
H4_INSEQ_CHAR = B
H4_OUTSEQ_CHAR = B
# Position:
H4_P_X = 33.98185312374887
H4_P_Y = 39.23795033616174
H4_P_Z = 36.57556804136061
# Orientation:
H4_DX_X = -0.1335680864722164
H4_DX_Y = -0.7675451120894934
H4_DX_Z = 0.6269242914289421
H4_DY_X = -0.0336414084755674
H4_DY_Y = -0.6287164260980305
H4_DY_Z = -0.7769066296475415
H4_DZ_X = 0.9904684860771269
H4_DZ_Y = -0.12486054806082336
H4_DZ_Z = 0.05815515132833582
#############  END of Description of junction: j1