#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS4HS6
FINGERPRINT = 150
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  19
S1_NAME_ID3 = 28
S1_NUM_ID5_ORIG =  19
S1_NUM_ID3_ORIG = 28
S1_NAME2_ID5 =  21
S1_NAME2_ID3 = 26
S1_NUM2_ID5_ORIG =  21
S1_NUM2_ID3_ORIG = 26
S1_SQ2 = GAAACA
S1_SQLEN2 = 6
S1_SQ = GAGAAACACA
S1_SQLEN = 10
S1_CHAR = C
## Properties of strand 2
S2_NAME_ID5 =  34
S2_NAME_ID3 = 45
S2_NUM_ID5_ORIG =  34
S2_NUM_ID3_ORIG = 45
S2_NAME2_ID5 =  36
S2_NAME2_ID3 = 43
S2_NUM2_ID5_ORIG =  36
S2_NUM2_ID3_ORIG = 43
S2_SQ2 = GUACAUUA
S2_SQLEN2 = 8
S2_SQ = UGGUACAUUACC
S2_SQLEN = 12
S2_CHAR = D
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 21
H1_OUTID2_ORIG = 43
H1_INSEQ_CHAR = C
H1_OUTSEQ_CHAR = D
# Position:
H1_P_X = 21.11289768238339
H1_P_Y = 30.40509092279624
H1_P_Z = 45.98139968390937
# Orientation:
H1_DX_X = 0.13575161242791722
H1_DX_Y = -0.04298367701500183
H1_DX_Z = -0.9898100339123062
H1_DY_X = -0.9212385570584694
H1_DY_Y = -0.37307833072608787
H1_DY_Z = -0.11014572225672481
H1_DZ_X = -0.364542207037875
H1_DZ_Y = 0.9268036268017639
H1_DZ_Z = -0.09024420554835189
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 36
H2_OUTID2_ORIG = 26
H2_INSEQ_CHAR = D
H2_OUTSEQ_CHAR = C
# Position:
H2_P_X = 42.14876887537115
H2_P_Y = 6.134133198740576
H2_P_Z = 41.989945333599664
# Orientation:
H2_DX_X = -0.4304269648448198
H2_DX_Y = -0.5346821325088893
H2_DX_Z = 0.7272191176737763
H2_DY_X = -0.4531258076228539
H2_DY_Y = -0.5687979768083045
H2_DY_Z = -0.6864006585405633
H2_DZ_X = 0.7806469306931376
H2_DZ_Y = -0.6249671021378091
H2_DZ_Z = 0.00254771365287354
#############  END of Description of junction: j1