############# Start of Description of junction: j85 # Number of strands: NUM_STRANDS = 3 LILLEY = HS2HS4HS3 FINGERPRINT = 81:85:164 LOOP_LENGTH_SUM = 9 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2177 S1_NAME_ID3 = 2182 S1_NUM_ID5_ORIG = 2177 S1_NUM_ID3_ORIG = 2182 S1_NAME2_ID5 = 2178 S1_NAME2_ID3 = 2181 S1_NUM2_ID5_ORIG = 2178 S1_NUM2_ID3_ORIG = 2181 S1_SQ2 = UCUA S1_SQLEN2 = 4 S1_SQ = UUCUAA S1_SQLEN = 6 S1_CHAR = 2 ## Properties of strand 2 S2_NAME_ID5 = 2072 S2_NAME_ID3 = 2079 S2_NUM_ID5_ORIG = 2072 S2_NUM_ID3_ORIG = 2079 S2_NAME2_ID5 = 2073 S2_NAME2_ID3 = 2078 S2_NUM2_ID5_ORIG = 2073 S2_NUM2_ID3_ORIG = 2078 S2_SQ2 = AUUGGG S2_SQLEN2 = 6 S2_SQ = CAUUGGGA S2_SQLEN = 8 S2_CHAR = 2 ## Properties of strand 3 S3_NAME_ID5 = 2203 S3_NAME_ID3 = 2209 S3_NUM_ID5_ORIG = 2203 S3_NUM_ID3_ORIG = 2209 S3_NAME2_ID5 = 2204 S3_NAME2_ID3 = 2208 S3_NUM2_ID5_ORIG = 2204 S3_NUM2_ID3_ORIG = 2208 S3_SQ2 = ACCGU S3_SQLEN2 = 5 S3_SQ = GACCGUG S3_SQLEN = 7 S3_CHAR = 2 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 2178 H1_OUTID2_ORIG = 2078 H1_INSEQ_CHAR = 2 H1_OUTSEQ_CHAR = 2 # Position: H1_P_X = 61.942970029361454 H1_P_Y = 205.8753419613231 H1_P_Z = 97.49019691460882 # Orientation: H1_DX_X = 0.037309063420963184 H1_DX_Y = 0.9481416284338593 H1_DX_Z = 0.31565089294575444 H1_DY_X = 0.8120711978919459 H1_DY_Y = -0.21284657845845345 H1_DY_Z = 0.543356884186494 H1_DZ_X = 0.5823644935441976 H1_DZ_Y = 0.2360588622977957 H1_DZ_Z = -0.77789961446814 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 2204 H2_OUTID2_ORIG = 2181 H2_INSEQ_CHAR = 2 H2_OUTSEQ_CHAR = 2 # Position: H2_P_X = 50.45850886816031 H2_P_Y = 202.79726521833427 H2_P_Z = 115.81242645772357 # Orientation: H2_DX_X = -0.6709898316855458 H2_DX_Y = -0.03610005888194223 H2_DX_Z = -0.7405872207399398 H2_DY_X = 0.3563848317074729 H2_DY_Y = -0.89157553205564 H2_DY_Z = -0.2794332162942226 H2_DZ_X = -0.6502018898030428 H2_DZ_Y = -0.4514308987967013 H2_DZ_Z = 0.6111036295982331 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 7 H3_INID2 = 2 H3_OUTID2 = 6 H3_INID2_ORIG = 2073 H3_OUTID2_ORIG = 2208 H3_INSEQ_CHAR = 2 H3_OUTSEQ_CHAR = 2 # Position: H3_P_X = 52.87348117013352 H3_P_Y = 185.11574631155776 H3_P_Z = 99.93350090016632 # Orientation: H3_DX_X = -0.9782997186208462 H3_DX_Y = -0.15201325499162976 H3_DX_Z = 0.14078931370391956 H3_DY_X = -0.1813714233873398 H3_DY_Y = 0.29978509687092014 H3_DY_Z = -0.9366073363328553 H3_DZ_X = 0.10017019179788633 H3_DZ_Y = -0.9418178518168645 H3_DZ_Z = -0.32085053634713745 ############# END of Description of junction: j85