############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 64:126:169 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCU S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = AGAUUUCC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 55.343769638669166 H1_P_Y = 156.35053055423313 H1_P_Z = 42.8585137001593 # Orientation: H1_DX_X = 0.16761346560397072 H1_DX_Y = 0.8476084865516214 H1_DX_Z = -0.503453651962019 H1_DY_X = -0.7404439383842458 H1_DY_Y = -0.22892553918381964 H1_DY_Z = -0.6319302743336692 H1_DZ_X = -0.6508828621635914 H1_DZ_Y = 0.4786992281538289 H1_DZ_Z = 0.589235563002326 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 48.0530388993575 H2_P_Y = 153.555215310318 H2_P_Z = 21.187285474072304 # Orientation: H2_DX_X = 0.43944316273264405 H2_DX_Y = 0.7641153171486224 H2_DX_Z = -0.4722472750862252 H2_DY_X = 0.21081987441168337 H2_DY_Y = -0.5987775627922645 H2_DY_Z = -0.7726709589790595 H2_DZ_X = -0.8731807872832391 H2_DZ_Y = 0.23998585874048217 H2_DZ_Z = -0.42421940116408763 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 68.36561785435578 H3_P_Y = 148.94068926766576 H3_P_Z = 31.933994841181182 # Orientation: H3_DX_X = 0.635502797943758 H3_DX_Y = 0.43550654200947747 H3_DX_Z = 0.6375501907086019 H3_DY_X = -0.10374522533733455 H3_DY_Y = -0.7700832576430798 H3_DY_Z = 0.6294511136836007 H3_DZ_X = 0.7650968056562277 H3_DZ_Y = -0.46616073211365006 H3_DZ_Z = -0.4442083405451669 ############# END of Description of junction: j1