############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 61:129:169 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCU S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = AGAUUUCC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 54.87774240105855 H1_P_Y = 156.33674404369143 H1_P_Z = 42.492964674490715 # Orientation: H1_DX_X = 0.1918233563878573 H1_DX_Y = 0.8294777437588721 H1_DX_Z = -0.5245669381049325 H1_DY_X = -0.7245357533106116 H1_DY_Y = -0.24084536906863718 H1_DY_Z = -0.6457874653264852 H1_DZ_X = -0.6620058474958697 H1_DZ_Y = 0.5039446207738365 H1_DZ_Z = 0.5547865148635083 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 47.62145340595667 H2_P_Y = 153.09711471959426 H2_P_Z = 21.03217707999253 # Orientation: H2_DX_X = 0.42748703016713563 H2_DX_Y = 0.7773167216595311 H2_DX_Z = -0.46155557982474704 H2_DY_X = 0.20181162212217885 H2_DY_Y = -0.5797296435290775 H2_DY_Z = -0.7894210597583822 H2_DZ_X = -0.881207641941046 H2_DZ_Y = 0.2443199841235355 H2_DZ_Z = -0.40469845211290334 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 68.36335863657743 H3_P_Y = 148.99609467646383 H3_P_Z = 31.734188045583423 # Orientation: H3_DX_X = 0.6044924685394619 H3_DX_Y = 0.4368343939633803 H3_DX_Z = 0.6661565639770473 H3_DY_X = -0.10596577402111507 H3_DY_Y = -0.7847127898915289 H3_DY_Z = 0.6107348787459088 H3_DZ_X = 0.7895315764522479 H3_DZ_Y = -0.43977443039733544 H3_DZ_Z = -0.42806347678062906 ############# END of Description of junction: j1