############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 60:129:170 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCU S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = AGAUUUCC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 54.60248044899177 H1_P_Y = 156.29731375078515 H1_P_Z = 42.52074438264274 # Orientation: H1_DX_X = 0.19017708022916935 H1_DX_Y = 0.8304366721142173 H1_DX_Z = -0.5236483665240925 H1_DY_X = -0.7168824517485106 H1_DY_Y = -0.24695415312561408 H1_DY_Z = -0.6519917151536845 H1_DZ_X = -0.6707549690688381 H1_DZ_Y = 0.4993882055694314 H1_DZ_Z = 0.5483604577352352 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 47.48611277754809 H2_P_Y = 153.29665033919696 H2_P_Z = 21.00949694509969 # Orientation: H2_DX_X = 0.4375302383185371 H2_DX_Y = 0.773797381683579 H2_DX_Z = -0.4580446513786356 H2_DY_X = 0.18829474697151483 H2_DY_Y = -0.5769378447824067 H2_DY_Z = -0.7947879034816516 H2_DZ_X = -0.8792680926883776 H2_DZ_Y = 0.26149633909003 H2_DZ_Z = -0.3981297349139581 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 68.24845016225439 H3_P_Y = 149.00345260068977 H3_P_Z = 31.69788553524658 # Orientation: H3_DX_X = 0.6119610856000719 H3_DX_Y = 0.4321250467505422 H3_DX_Z = 0.6623983496975292 H3_DY_X = -0.10568828992538215 H3_DY_Y = -0.7853439538123439 H3_DY_Z = 0.609971195699476 H3_DZ_X = 0.7837943704083585 H3_DZ_Y = -0.4432863839339518 H3_DZ_Z = -0.43492938131944925 ############# END of Description of junction: j1