############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 61:128:171 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCU S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = AGAUUUCC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 54.785568488195786 H1_P_Y = 156.11527486853316 H1_P_Z = 42.2611023282959 # Orientation: H1_DX_X = 0.2144267952572605 H1_DX_Y = 0.8365769402425656 H1_DX_Z = -0.5041430080146796 H1_DY_X = -0.7163319867737741 H1_DY_Y = -0.21618983680312454 H1_DY_Z = -0.663423273022417 H1_DZ_X = -0.6639952064589423 H1_DZ_Y = 0.503389488882533 H1_DZ_Z = 0.5529099278201954 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 47.73285809106421 H2_P_Y = 153.2811209692144 H2_P_Z = 20.676570991285384 # Orientation: H2_DX_X = 0.4226938778917244 H2_DX_Y = 0.7861979225446021 H2_DX_Z = -0.450802298329787 H2_DY_X = 0.21138340012635126 H2_DY_Y = -0.5692332569342682 H2_DY_Z = -0.7945379521149505 H2_DZ_X = -0.881275747847333 H2_DZ_Y = 0.24055420550590156 H2_DZ_Z = -0.40680060283824204 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 68.24750093486827 H3_P_Y = 149.0193951393114 H3_P_Z = 31.5558224414806 # Orientation: H3_DX_X = 0.6252019788547472 H3_DX_Y = 0.42297611989846473 H3_DX_Z = 0.6559067674843178 H3_DY_X = -0.11117074896075962 H3_DY_Y = -0.7835738841239674 H3_DY_Z = 0.6112716521272361 H3_DZ_X = 0.7725047250416139 H3_DZ_Y = -0.45508589311742753 H3_DZ_Z = -0.44286937089159295 ############# END of Description of junction: j1