############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 139 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 39.68539902856 H1_P_Y = 128.38674786763397 H1_P_Z = 14.151098889823576 # Orientation: H1_DX_X = 0.12900415063690218 H1_DX_Y = -0.7867181597203086 H1_DX_Z = 0.6036824217125734 H1_DY_X = 0.6123595229713246 H1_DY_Y = 0.5420309575436306 H1_DY_Z = 0.5755156433066482 H1_DZ_X = -0.7799831688855718 H1_DZ_Y = 0.29542677304306153 H1_DZ_Z = 0.551678600296027 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 60.55640735634734 H2_P_Y = 119.33077726426538 H2_P_Z = 1.1097837486181987 # Orientation: H2_DX_X = -0.9440127247469903 H2_DX_Y = -0.3288502265238691 H2_DX_Z = 0.026410301607013187 H2_DY_X = -0.23319444099986697 H2_DY_Y = 0.6085016022604322 H2_DY_Z = -0.7585157564172628 H2_DZ_X = 0.23336736747568665 H2_DZ_Y = -0.7222072614988662 H2_DZ_Z = -0.6511193003096869 ############# END of Description of junction: j4