############# Start of Description of junction: k1 # Number of strands: NUM_STRANDS = 2 LILLEY = HS9HS9 FINGERPRINT = 172 LOOP_LENGTH_SUM = 18 KISSING_LOOP = TRUE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 5 S1_NAME_ID3 = 19 S1_NUM_ID5_ORIG = 5 S1_NUM_ID3_ORIG = 19 S1_NAME2_ID5 = 7 S1_NAME2_ID3 = 17 S1_NUM2_ID5_ORIG = 7 S1_NUM2_ID3_ORIG = 17 S1_SQ2 = GAAGUGCACAC S1_SQLEN2 = 11 S1_SQ = CUGAAGUGCACACAG S1_SQLEN = 15 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 5 S2_NAME_ID3 = 19 S2_NUM_ID5_ORIG = 5 S2_NUM_ID3_ORIG = 19 S2_NAME2_ID5 = 7 S2_NAME2_ID3 = 17 S2_NUM2_ID5_ORIG = 7 S2_NUM2_ID3_ORIG = 17 S2_SQ2 = GAAGUGCACAC S2_SQLEN2 = 11 S2_SQ = CUGAAGUGCACACAG S2_SQLEN = 15 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 7 H1_OUTID2_ORIG = 17 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 25.903572257525404 H1_P_Y = 136.1897014318181 H1_P_Z = 56.58664007176736 # Orientation: H1_DX_X = -0.05301270207587194 H1_DX_Y = -0.06375097475910252 H1_DX_Z = 0.9965568055238379 H1_DY_X = 0.9801541092458308 H1_DY_Y = -0.19421786282643438 H1_DY_Z = 0.03971578889601801 H1_DZ_X = 0.19101721269854366 H1_DZ_Y = 0.9788846893155494 H1_DZ_Z = 0.07278179357841452 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 3 H2_OUTID2 = 13 H2_INID2_ORIG = 7 H2_OUTID2_ORIG = 17 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 10.822517232059175 H2_P_Y = 97.78417016724717 H2_P_Z = 55.848170640243985 # Orientation: H2_DX_X = -0.16912389586910237 H2_DX_Y = 0.09821467481306456 H2_DX_Z = 0.980689036085046 H2_DY_X = -0.949125120037051 H2_DY_Y = 0.2519399871217587 H2_DY_Z = -0.18891201497984156 H2_DZ_X = -0.2656287152412471 H2_DZ_Y = -0.962746135043119 H2_DZ_Z = 0.05060894287410633 ############# END of Description of junction: k1