############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 169 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 90 S1_NAME_ID3 = 97 S1_NUM_ID5_ORIG = 90 S1_NUM_ID3_ORIG = 97 S1_NAME2_ID5 = 92 S1_NAME2_ID3 = 95 S1_NUM2_ID5_ORIG = 92 S1_NUM2_ID3_ORIG = 95 S1_SQ2 = UAAG S1_SQLEN2 = 4 S1_SQ = GCUAAGCU S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 110 S2_NAME_ID3 = 116 S2_NUM_ID5_ORIG = 110 S2_NUM_ID3_ORIG = 116 S2_NAME2_ID5 = 112 S2_NAME2_ID3 = 114 S2_NUM2_ID5_ORIG = 112 S2_NUM2_ID3_ORIG = 114 S2_SQ2 = AAA S2_SQLEN2 = 3 S2_SQ = AGAAAGU S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 92 H1_OUTID2_ORIG = 114 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 43.673202860639535 H1_P_Y = 44.026576225623884 H1_P_Z = 34.28718521915804 # Orientation: H1_DX_X = -0.9027232358080823 H1_DX_Y = 0.41500114071943983 H1_DX_Z = 0.11342315783717538 H1_DY_X = 0.4107416578658629 H1_DY_Y = 0.9097911185672061 H1_DY_Z = -0.0597612840376911 H1_DZ_X = -0.12799238268660673 H1_DZ_Y = -0.007360283812126056 H1_DZ_Z = -0.9917478390177692 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 112 H2_OUTID2_ORIG = 95 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 43.40857679255012 H2_P_Y = 46.770067075733074 H2_P_Z = 56.07903225865792 # Orientation: H2_DX_X = 0.24049396851961546 H2_DX_Y = -0.9706235822851994 H2_DX_Z = 0.007246559013800891 H2_DY_X = 0.9254795497178989 H2_DY_Y = 0.2270447585858406 H2_DY_Z = -0.3032132593615273 H2_DZ_X = 0.2926606467559836 H2_DZ_Y = 0.07962750222471726 H2_DZ_Z = 0.9528951709027709 ############# END of Description of junction: j2