############# Start of Description of junction: k1 # Number of strands: NUM_STRANDS = 2 LILLEY = HS9HS9 FINGERPRINT = 177 LOOP_LENGTH_SUM = 18 KISSING_LOOP = TRUE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 5 S1_NAME_ID3 = 19 S1_NUM_ID5_ORIG = 5 S1_NUM_ID3_ORIG = 19 S1_NAME2_ID5 = 7 S1_NAME2_ID3 = 17 S1_NUM2_ID5_ORIG = 7 S1_NUM2_ID3_ORIG = 17 S1_SQ2 = GAAGUGCACAC S1_SQLEN2 = 11 S1_SQ = CUGAAGUGCACACAG S1_SQLEN = 15 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 5 S2_NAME_ID3 = 19 S2_NUM_ID5_ORIG = 5 S2_NUM_ID3_ORIG = 19 S2_NAME2_ID5 = 7 S2_NAME2_ID3 = 17 S2_NUM2_ID5_ORIG = 7 S2_NUM2_ID3_ORIG = 17 S2_SQ2 = GAAGUGCACAC S2_SQLEN2 = 11 S2_SQ = CUGAAGUGCACACAG S2_SQLEN = 15 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 7 H1_OUTID2_ORIG = 17 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 25.2571763046333 H1_P_Y = 76.46439915911813 H1_P_Z = 56.733488318828606 # Orientation: H1_DX_X = -0.04389138837086648 H1_DX_Y = -0.038278508609565165 H1_DX_Z = 0.9983027105069411 H1_DY_X = 0.9843181397925349 H1_DY_Y = -0.1725509215853691 H1_DY_Z = 0.036660320994265305 H1_DZ_X = 0.17085475030634356 H1_DZ_Y = 0.9842565393425957 H1_DZ_Z = 0.045251729901650606 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 3 H2_OUTID2 = 13 H2_INID2_ORIG = 7 H2_OUTID2_ORIG = 17 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 11.598381159307424 H2_P_Y = 38.422458333855566 H2_P_Z = 56.534318362016684 # Orientation: H2_DX_X = -0.17100927448950287 H2_DX_Y = 0.0410727819576735 H2_DX_Z = 0.9844129492346312 H2_DY_X = -0.9712185289869293 H2_DY_Y = 0.16110770507950178 H2_DY_Z = -0.17543909574688854 H2_DZ_X = -0.1658022828282011 H2_DZ_Y = -0.9860818089521146 H2_DZ_Z = 0.012339735114018424 ############# END of Description of junction: k1