############# Start of Description of junction: j19 # Number of strands: NUM_STRANDS = 3 LILLEY = HS2HS4HS9 FINGERPRINT = 54:85:123 LOOP_LENGTH_SUM = 15 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1343 S1_NAME_ID3 = 1350 S1_NUM_ID5_ORIG = 1343 S1_NUM_ID3_ORIG = 1350 S1_NAME2_ID5 = 1345 S1_NAME2_ID3 = 1348 S1_NUM2_ID5_ORIG = 1345 S1_NUM2_ID3_ORIG = 1348 S1_SQ2 = UAGU S1_SQLEN2 = 4 S1_SQ = GCUAGUAA S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 931 S2_NAME_ID3 = 940 S2_NUM_ID5_ORIG = 931 S2_NUM_ID3_ORIG = 940 S2_NAME2_ID5 = 933 S2_NAME2_ID3 = 938 S2_NUM2_ID5_ORIG = 933 S2_NUM2_ID3_ORIG = 938 S2_SQ2 = GCACAA S2_SQLEN2 = 6 S2_SQ = CCGCACAAGC S2_SQLEN = 10 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1372 S3_NAME_ID3 = 1386 S3_NUM_ID5_ORIG = 1372 S3_NUM_ID3_ORIG = 1386 S3_NAME2_ID5 = 1374 S3_NAME2_ID3 = 1384 S3_NUM2_ID5_ORIG = 1374 S3_NUM2_ID3_ORIG = 1384 S3_SQ2 = AAUACGUUCCC S3_SQLEN2 = 11 S3_SQ = UGAAUACGUUCCCGG S3_SQLEN = 15 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 10 H1_INID2 = 3 H1_OUTID2 = 8 H1_INID2_ORIG = 1345 H1_OUTID2_ORIG = 938 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 226.30614261056664 H1_P_Y = 124.02119472339628 H1_P_Z = -18.4619230630666 # Orientation: H1_DX_X = 0.5719524223292751 H1_DX_Y = 0.8061510560722667 H1_DX_Z = -0.15162750866922536 H1_DY_X = 0.08528069239858382 H1_DY_Y = 0.1254072265081163 H1_DY_Z = 0.9884332203257706 H1_DZ_X = 0.8158416697470727 H1_DZ_Y = -0.578267673602042 H1_DZ_Z = 0.0029778467392169716 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 1374 H2_OUTID2_ORIG = 1348 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 231.90129595917364 H2_P_Y = 140.45412611239135 H2_P_Z = -3.845891494013097 # Orientation: H2_DX_X = 0.09983593295896753 H2_DX_Y = -0.7538172386375663 H2_DX_Z = -0.6494554312830694 H2_DY_X = 0.9524126059831133 H2_DY_Y = 0.26132343237313194 H2_DY_Z = -0.15690854551987954 H2_DZ_X = 0.2879982889786845 H2_DZ_Y = -0.6028844287469894 H2_DZ_Z = 0.7440345093607945 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 15 H3_INID2 = 3 H3_OUTID2 = 13 H3_INID2_ORIG = 933 H3_OUTID2_ORIG = 1384 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 201.31559977415458 H3_P_Y = 126.59764064168365 H3_P_Z = -21.059892348992545 # Orientation: H3_DX_X = 0.18782467933218072 H3_DX_Y = 0.059534011511061635 H3_DX_Z = 0.9803966499877212 H3_DY_X = -0.35117898684742954 H3_DY_Y = 0.936250299591137 H3_DY_Z = 0.010425723588362246 H3_DZ_X = -0.9172759721210184 H3_DZ_Y = -0.34625291044108053 H3_DZ_Z = 0.19675800614078653 ############# END of Description of junction: j19