############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 145 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 638 S1_NAME_ID3 = 646 S1_NUM_ID5_ORIG = 638 S1_NUM_ID3_ORIG = 646 S1_NAME2_ID5 = 640 S1_NAME2_ID3 = 644 S1_NUM2_ID5_ORIG = 640 S1_NUM2_ID3_ORIG = 644 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 593 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 593 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 595 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 595 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 640 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 116.35061756660538 H1_P_Y = 100.79303832404322 H1_P_Z = -18.733066458945252 # Orientation: H1_DX_X = 0.13428531493701712 H1_DX_Y = 0.9614219937867148 H1_DX_Z = 0.24007333057928903 H1_DY_X = -0.9826077333023022 H1_DY_Y = 0.0978328577180605 H1_DY_Z = 0.15783147469758774 H1_DZ_X = 0.1282555910935912 H1_DZ_Y = -0.2570923604735924 H1_DZ_Z = 0.9578382021716152 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 595 H2_OUTID2_ORIG = 644 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 122.47306093607914 H2_P_Y = 111.59985051921433 H2_P_Z = -38.7821806095174 # Orientation: H2_DX_X = 0.1652705839697859 H2_DX_Y = -0.9862477179568714 H2_DX_Z = 0.0010358084538992784 H2_DY_X = -0.8830479885296825 H2_DY_Y = -0.14844443379453764 H2_DY_Z = -0.44518591625196535 H2_DZ_X = 0.43921735396949657 H2_DZ_Y = 0.0726614677823676 H2_DZ_Z = -0.8954375617940897 ############# END of Description of junction: j9